RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 GPATCH4Q5T3I0 446 aaKnown RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 MYSM1Q5VVJ2 828 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 SEPT14Q6ZU15 432 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 RNF135Q8IUD6 432 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 MYOCDQ8IZQ8 938 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 POP1Q99575 1024 aaKnown RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 ALG1Q9BT22 464 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 ALG13Q9NP73 1137 aaKnown RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 COL20A1Q9P218 1284 aa8.98□□□□□ -0.97
ABCD4-220ENST00000553998 RBM8AQ9Y5S9 174 aaKnown RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 FRMPD2Q68DX3 1309 aaPredicted RBP8.98□□□□□ -0.97
ABCD4-220ENST00000553998 PTPRSQ13332 1948 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 C5orf42Q9H799 3197 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 RGS20O76081 388 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 EYA4O95677 639 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 NR3C2P08235 984 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 BMPR1AP36894 532 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 HAND2P61296 217 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 DLX2Q07687 328 aaPredicted RBP8.97□□□□□ -0.97
ABCD4-220ENST00000553998 HYAL1Q12794 435 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CBX2Q14781 532 aaPredicted RBP8.97□□□□□ -0.97
ABCD4-220ENST00000553998 NECTIN1Q15223 517 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 KCNV1Q6PIU1 500 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 MFSD6Q6ZSS7 791 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CHST3Q7LGC8 479 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 RPAINQ86UA6 219 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 MCF2L2Q86YR7 1114 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 SEPT8Q92599 483 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 APBB2Q92870 758 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CLP1Q92989 425 aaKnown RBP8.97□□□□□ -0.97
ABCD4-220ENST00000553998 YME1L1Q96TA2 773 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 RMDN3Q96TC7 470 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 RC3H2Q9HBD1 1191 aaKnown RBP8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CLDND1Q9NY35 253 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 MUTYHQ9UIF7 546 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 ABCB11O95342 1321 aa8.97□□□□□ -0.97
ABCD4-220ENST00000553998 CYP21A2P08686 494 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 TGFB3P10600 412 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 THPOP40225 353 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 FOXK2Q01167 660 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 TCF15Q12870 199 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 ADAM15Q13444 863 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 SMAD4Q13485 552 aaKnown RBP8.96□□□□□ -0.98
ABCD4-220ENST00000553998 HSDL1Q3SXM5 330 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 TSGA10IPQ3SY00 556 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 C8orf34Q49A92 452 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 FAM26DQ5JW98 314 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 CELF3Q5SZQ8 465 aaKnown RBP8.96□□□□□ -0.98
ABCD4-220ENST00000553998 IER5LQ5T953 404 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 CREB3L3Q68CJ9 461 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 TRIM67Q6ZTA4 783 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 DGKHQ86XP1 1220 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 TBC1D10CQ8IV04 446 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 DHX37Q8IY37 1157 aaKnown RBP8.96□□□□□ -0.98
ABCD4-220ENST00000553998 ESR2Q92731 530 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 KCNB2Q92953 911 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 IL17RAQ96F46 866 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 MSLNLQ96KJ4 702 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 C11orf84Q9BUA3 381 aaPredicted RBP8.96□□□□□ -0.98
ABCD4-220ENST00000553998 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 KRT23Q9C075 422 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 MAP3K20Q9NYL2 800 aaKnown RBP8.96□□□□□ -0.98
ABCD4-220ENST00000553998 RWDD3Q9Y3V2 267 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 MRVI1Q9Y6F6 885 aa8.96□□□□□ -0.98
ABCD4-220ENST00000553998 C17orf102A2RUQ5 167 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 TMEM221A6NGB7 291 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 LOC730098B7Z3J9 87 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 RBAK-RBAKDNI3L0D1 243 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 M0R296 226 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 SLC27A2O14975 620 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 GRM6O15303 877 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 ZNF286BP0CG31 522 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 HSPA4P34932 840 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 HSD17B4P51659 736 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 ADAM17P78536 824 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 TRDNQ13061 729 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 CAMK1Q14012 370 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 KRT32Q14532 448 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 USH1GQ495M9 461 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 CCDC178Q5BJE1 867 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 ARHGEF16Q5VV41 709 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 STOX1Q6ZVD7 989 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 FIBCD1Q8N539 461 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 SAMD3Q8N6K7 520 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 ZNF689Q96CS4 500 aaPredicted RBP8.95□□□□□ -0.98
ABCD4-220ENST00000553998 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 USP26Q9BXU7 913 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 UBA5Q9GZZ9 404 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 PXMP2Q9NR77 195 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 TOMM22Q9NS69 142 aa8.95□□□□□ -0.98
ABCD4-220ENST00000553998 MRPL11Q9Y3B7 192 aaKnown RBP8.95□□□□□ -0.98
ABCD4-220ENST00000553998 SIP14410 1827 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms