RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 ANKRD40Q6AI12 368 aa9.98□□□□□ -0.81
AL049839.2-201ENST00000553947 KIAA0895Q8NCT3 520 aa9.98□□□□□ -0.81
AL049839.2-201ENST00000553947 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 MYMKA6NI61 221 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L15C9J2P7 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L13C9JLJ4 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L11C9JVI0 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L18D6R9N7 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L22D6RA61 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L17D6RBQ6 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L19D6RCP7 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L20D6RJB6 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 PSMA7O14818 248 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 FECHP22830 423 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 GGCXP38435 758 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 SNAP25P60880 206 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 TUBB4BP68371 445 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L24Q0WX57 530 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 SEPT2Q15019 361 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ECM1Q16610 540 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 GPATCH4Q5T3I0 446 aaKnown RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 USP17L6PQ6QN14 398 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 CNGA4Q8IV77 575 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ACRBPQ8NEB7 543 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 FLAD1Q8NFF5 587 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 HAS1Q92839 578 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ABHD10Q9NUJ1 306 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 H0YIN7 160 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 GDF11O95390 407 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 TUBBP07437 444 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ORC2Q13416 577 aaPredicted RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 QRICH1Q2TAL8 776 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 DYMQ7RTS9 669 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 MB21D1Q8N884 522 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 THAP9Q9H5L6 903 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 TDRD3Q9H7E2 651 aaKnown RBP9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 MAGEF1Q9HAY2 307 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 SLC39A2Q9NP94 309 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
AL049839.2-201ENST00000553947 ZEB2O60315 1214 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 TBC1D8BQ0IIM8 1120 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 CSGALNACT2Q8N6G5 542 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 CUL5Q93034 780 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 P2RX5Q93086 422 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 DHTKD1Q96HY7 919 aaPredicted RBP9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 CCDC17Q96LX7 622 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 SH3GL3Q99963 347 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 NAA15Q9BXJ9 866 aaKnown RBP9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 IDI2Q9BXS1 227 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 SEMA6BQ9H3T3 888 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 PSTPIP2Q9H939 334 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 KIF9Q9HAQ2 790 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 PI4KBQ9UBF8 816 aa9.96□□□□□ -0.81
AL049839.2-201ENST00000553947 TTC26A0AVF1 554 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 LGALS16A8MUM7 142 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 PES1O00541 588 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 CAND2O75155 1236 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 CCNE1P24864 410 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 KRT9P35527 623 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 ARHGAP25P42331 645 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 PPFIA1Q13136 1202 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 RRP1BQ14684 758 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 NBPF9Q3BBW0 867 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 SLFN13Q68D06 897 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 P2RX7Q99572 595 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 CHP1Q99653 195 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 DDX25Q9UHL0 483 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 TMCO5BA8MYB1 307 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 B4DLN1 442 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 EEF1GP26641 437 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 SLC1A4P43007 532 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 KLK7P49862 253 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 CCDC40Q4G0X9 1142 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 PPP4R3AQ6IN85 833 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 STYK1Q6J9G0 422 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 MICALCLQ6ZW33 695 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 SV2BQ7L1I2 683 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 NOA1Q8NC60 698 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 GLIS3Q8NEA6 775 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 SNX29Q8TEQ0 813 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 C7orf43Q8WVR3 580 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 MKL1Q969V6 931 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 MRIQ9BWK5 157 aa9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 DHX36Q9H2U1 1008 aaKnown RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.96□□□□□ -0.82
AL049839.2-201ENST00000553947 RASSF10A6NK89 507 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms