RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SP4Q02446 784 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 FAM47CQ5HY64 1035 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 CHRDL2Q6WN34 429 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 FAM126BQ8IXS8 530 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 DAGLBQ8NCG7 672 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 CRYGNQ8WXF5 182 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 PHF20Q9BVI0 1012 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 KCNH7Q9NS40 1196 aa26.51■■□□□ 1.83
NEK9-203ENST00000553945 SCN10AQ9Y5Y9 1956 aa26.5■■□□□ 1.83
NEK9-203ENST00000553945 TRIM43BA6NCK2 446 aa26.5■■□□□ 1.83
NEK9-203ENST00000553945 ARP10275 920 aa26.5■■□□□ 1.83
NEK9-203ENST00000553945 NPY5RQ15761 445 aa26.5■■□□□ 1.83
NEK9-203ENST00000553945 KAT2BQ92831 832 aa26.5■■□□□ 1.83
NEK9-203ENST00000553945 TRIM43Q96BQ3 446 aaPredicted RBP26.5■■□□□ 1.83
NEK9-203ENST00000553945 LBHD1Q9BQE6 289 aaPredicted RBP26.5■■□□□ 1.83
NEK9-203ENST00000553945 MEIS1O00470 390 aa26.49■■□□□ 1.83
NEK9-203ENST00000553945 HOXD8P13378 290 aaPredicted RBP26.49■■□□□ 1.83
NEK9-203ENST00000553945 MAGEA10P43363 369 aaPredicted RBP26.49■■□□□ 1.83
NEK9-203ENST00000553945 MDM2Q00987 491 aaPredicted RBP26.49■■□□□ 1.83
NEK9-203ENST00000553945 NIPA1Q7RTP0 329 aa26.49■■□□□ 1.83
NEK9-203ENST00000553945 GPR20Q99678 358 aa26.49■■□□□ 1.83
NEK9-203ENST00000553945 TRPV6Q9H1D0 765 aa26.49■■□□□ 1.83
NEK9-203ENST00000553945 COLQQ9Y215 455 aaPredicted RBP26.49■■□□□ 1.83
NEK9-203ENST00000553945 TELO2Q9Y4R8 837 aa26.49■■□□□ 1.83
NEK9-203ENST00000553945 FAM86B1E9PN63 330 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 M0R2N6 131 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 CD4P01730 458 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 FAM86B2P0C5J1 330 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 PSEN2P49810 448 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 FOSBP53539 338 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 NFRKBQ6P4R8 1299 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 PLA2G4DQ86XP0 818 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
NEK9-203ENST00000553945 AGO4Q9HCK5 861 aaKnown RBP26.48■■□□□ 1.83
NEK9-203ENST00000553945 LTBP2Q14767 1821 aa26.47■■□□□ 1.83
NEK9-203ENST00000553945 KIAA0355O15063 1070 aa26.47■■□□□ 1.83
NEK9-203ENST00000553945 B4GALT4O60513 344 aa26.47■■□□□ 1.83
NEK9-203ENST00000553945 F2P00734 622 aa26.47■■□□□ 1.83
NEK9-203ENST00000553945 LLPHQ9BRT6 129 aaKnown RBP26.47■■□□□ 1.83
NEK9-203ENST00000553945 KATNAL1Q9BW62 490 aa26.47■■□□□ 1.83
NEK9-203ENST00000553945 IGLV3-22A0A075B6J6 115 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 RAG1P15918 1043 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 TRIM29Q14134 588 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 MFSD10Q14728 455 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 TBCKQ8TEA7 893 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 GDF15Q99988 308 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 SDF4Q9BRK5 362 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 TBX21Q9UL17 535 aa26.46■■□□□ 1.83
NEK9-203ENST00000553945 LGALS2P05162 132 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 USP11P51784 963 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 PTPN11Q06124 597 aaPredicted RBP26.45■■□□□ 1.82
NEK9-203ENST00000553945 KIAA0753Q2KHM9 967 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 PRR16Q569H4 304 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 UTP14CQ5TAP6 766 aaKnown RBP26.45■■□□□ 1.82
NEK9-203ENST00000553945 KRT25Q7Z3Z0 450 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 BADQ92934 168 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 UIMC1Q96RL1 719 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 C16orf70Q9BSU1 422 aa26.45■■□□□ 1.82
NEK9-203ENST00000553945 JPH1Q9HDC5 661 aaPredicted RBP26.45■■□□□ 1.82
NEK9-203ENST00000553945 TRMT13Q9NUP7 481 aaKnown RBP26.45■■□□□ 1.82
NEK9-203ENST00000553945 NFASCO94856 1347 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 CCDC194A0A1B0GVG4 234 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 CD2BP2O95400 341 aaKnown RBP26.44■■□□□ 1.82
NEK9-203ENST00000553945 ITGB8P26012 769 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 CIITAP33076 1130 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 SETQ01105 290 aaPredicted RBP26.44■■□□□ 1.82
NEK9-203ENST00000553945 ITGB3BPQ13352 177 aaPredicted RBP26.44■■□□□ 1.82
NEK9-203ENST00000553945 NONOQ15233 471 aaKnown RBP eCLIP26.44■■□□□ 1.82
NEK9-203ENST00000553945 C7orf31Q8N865 590 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 OXER1Q8TDS5 423 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 SLC9A2Q9UBY0 812 aa26.44■■□□□ 1.82
NEK9-203ENST00000553945 HAS3O00219 553 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 EDIL3O43854 480 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 KRT2P35908 639 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 TCF7P36402 384 aaPredicted RBP26.43■■□□□ 1.82
NEK9-203ENST00000553945 SEPT1Q8WYJ6 367 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 ZNF577Q9BSK1 485 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 UBE2OQ9C0C9 1292 aaKnown RBP26.43■■□□□ 1.82
NEK9-203ENST00000553945 BRMS1Q9HCU9 246 aa26.43■■□□□ 1.82
NEK9-203ENST00000553945 GSTTP1A0A1W2PQM5 241 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 H3BRB1 525 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 TIMP1P01033 207 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 SUPT20HL2P0C7V6 817 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 MCM2P49736 904 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 HMGN5P82970 282 aaKnown RBP26.42■■□□□ 1.82
NEK9-203ENST00000553945 TRIM50Q86XT4 487 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 PPP1R12CQ9BZL4 782 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 PRO3102Q9H379 93 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 TUT1Q9H6E5 874 aaKnown RBP26.42■■□□□ 1.82
NEK9-203ENST00000553945 HDAC6Q9UBN7 1215 aa26.42■■□□□ 1.82
NEK9-203ENST00000553945 DDX39AO00148 427 aaKnown RBP26.41■■□□□ 1.82
NEK9-203ENST00000553945 IPO5O00410 1097 aaKnown RBP26.41■■□□□ 1.82
NEK9-203ENST00000553945 INF2Q27J81 1249 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 KRT40Q6A162 431 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 GDF6Q6KF10 455 aaPredicted RBP26.41■■□□□ 1.82
NEK9-203ENST00000553945 SESTD1Q86VW0 696 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 FAM184AQ8NB25 1140 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 TMX3Q96JJ7 454 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 NOD1Q9Y239 953 aa26.41■■□□□ 1.82
NEK9-203ENST00000553945 RANBP2P49792 3224 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms