RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
NEK9-202ENST00000553823 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
NEK9-202ENST00000553823 SPATA31C2B4DYI2 1134 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
NEK9-202ENST00000553823 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
NEK9-202ENST00000553823 ICAM3P32942 547 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
NEK9-202ENST00000553823 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 MORN1Q5T089 497 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 IQUBQ8NA54 791 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 CNNM3Q8NE01 707 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 ERMNQ8TAM6 284 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 SNX29Q8TEQ0 813 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 DHX58Q96C10 678 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 MMTAG2Q9BU76 263 aaKnown RBP13.22□□□□□ -0.29
NEK9-202ENST00000553823 DISC1Q9NRI5 854 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 TBC1D22BQ9NU19 505 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 PKD2L1Q9P0L9 805 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 SERTAD1Q9UHV2 236 aa13.22□□□□□ -0.29
NEK9-202ENST00000553823 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 SLFN14P0C7P3 912 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 STAT6P42226 847 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 ITGB3BPQ13352 177 aaPredicted RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 E2F4Q16254 413 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 KANK3Q6NY19 840 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 SEPT14Q6ZU15 432 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 ARMCX2Q7L311 632 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 UNC45AQ9H3U1 944 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 TCEAL9Q9UHQ7 104 aa13.21□□□□□ -0.29
NEK9-202ENST00000553823 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 MYH9P35579 1960 aaKnown RBP13.21□□□□□ -0.29
NEK9-202ENST00000553823 NFASCO94856 1347 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
NEK9-202ENST00000553823 EML1O00423 815 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 CHMP2AO43633 222 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 ATP9AO75110 1047 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
NEK9-202ENST00000553823 TBC1D8O95759 1140 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 KCNA2P16389 499 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 PLCG1P19174 1290 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 CCT6AP40227 531 aaKnown RBP13.2□□□□□ -0.3
NEK9-202ENST00000553823 FCGRTP55899 365 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 GRB10Q13322 594 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 HYIQ5T013 277 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
NEK9-202ENST00000553823 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 PLIN2Q99541 437 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 RNF186Q9NXI6 227 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 THSD7BQ9C0I4 1608 aa13.2□□□□□ -0.3
NEK9-202ENST00000553823 SYCE3A1L190 88 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 TRPA1O75762 1119 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 HOXC6P09630 235 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 TGFB3P10600 412 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 RPA1P27694 616 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 LACTBP83111 547 aaPredicted RBP13.19□□□□□ -0.3
NEK9-202ENST00000553823 KRT76Q01546 638 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 EPHA7Q15375 998 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 TMEM119Q4V9L6 283 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 NAALADL2Q58DX5 795 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 MSL3Q8N5Y2 521 aaKnown RBP13.19□□□□□ -0.3
NEK9-202ENST00000553823 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
NEK9-202ENST00000553823 NPLOC4Q8TAT6 608 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 USP6NLQ92738 828 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
NEK9-202ENST00000553823 POLR3CQ9BUI4 534 aaPredicted RBP13.19□□□□□ -0.3
NEK9-202ENST00000553823 NT5C3AQ9H0P0 336 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
NEK9-202ENST00000553823 LOXHD1Q8IVV2 1947 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 MED24O75448 989 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 CTGFP29279 349 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 RGS2P41220 211 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 PSMC4P43686 418 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms