RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 PSTPIP2Q9H939 334 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 TMEM260Q9NX78 707 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 DDX41Q9UJV9 622 aaKnown RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 ZMYND8Q9ULU4 1186 aaPredicted RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 GRIN2DO15399 1336 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 SMCO2A6NFE2 343 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 SORBS3O60504 671 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 EIF3JO75822 258 aaKnown RBP9.42□□□□□ -0.9
RDH11-205ENST00000553816 CTDNEP1O95476 244 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 NEK4P51957 841 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 ARHGAP1Q07960 439 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 SEMA3FQ13275 785 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 E2F4Q16254 413 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 ME3Q16798 604 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 TRIM60Q495X7 471 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
RDH11-205ENST00000553816 CXCL17Q6UXB2 119 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 NECAB1Q8N987 351 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 OR6J1Q8NGC5 347 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 CUL5Q93034 780 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 AIFM3Q96NN9 605 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 MPHOSPH6Q99547 160 aaKnown RBP9.42□□□□□ -0.9
RDH11-205ENST00000553816 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
RDH11-205ENST00000553816 AP5M1Q9H0R1 490 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 RIC8AQ9NPQ8 531 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 ATP11BQ9Y2G3 1177 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 Q9Y3F1 56 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 TELO2Q9Y4R8 837 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
RDH11-205ENST00000553816 TRIP12Q14669 1992 aaPredicted RBP9.42□□□□□ -0.9
RDH11-205ENST00000553816 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 B4DLN1 442 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 PFKFB2O60825 505 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 RNF40O75150 1001 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 CCND2P30279 289 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
RDH11-205ENST00000553816 MRPL12P52815 198 aaKnown RBP9.41□□□□□ -0.9
RDH11-205ENST00000553816 PSMC6P62333 389 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 PCSK9Q8NBP7 692 aaKnown RBP9.41□□□□□ -0.9
RDH11-205ENST00000553816 RASGRP4Q8TDF6 673 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 C22orf23Q9BZE7 217 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 SPC25Q9HBM1 224 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 STARD7Q9NQZ5 370 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 VPS54Q9P1Q0 977 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
RDH11-205ENST00000553816 A6NJR5 290 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 RBAK-RBAKDNI3L0D1 243 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 hCG_1984214I3L0E3 225 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 NKRFO15226 690 aaKnown RBP eCLIP9.4□□□□□ -0.9
RDH11-205ENST00000553816 EDIL3O43854 480 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 MYL3P08590 195 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 ITGB8P26012 769 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 CDK7P50613 346 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 ADCY7P51828 1080 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 PRSS12P56730 875 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 PURAQ00577 322 aaKnown RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 TLE2Q04725 743 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 C1orf53Q5VUE5 145 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 JAKMIP3Q5VZ66 844 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 PCNX4Q63HM2 1172 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 CYP2W1Q8TAV3 490 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 AFG1LQ8WV93 481 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 GLT1D1Q96MS3 346 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 INPP4AQ96PE3 977 aaPredicted RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 ZMYND12Q9H0C1 365 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
RDH11-205ENST00000553816 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 NR2E3Q9Y5X4 410 aa9.4□□□□□ -0.9
RDH11-205ENST00000553816 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 ELP1O95163 1332 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 ESYT2A0FGR8 921 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 TRIM43BA6NCK2 446 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 ARVCFO00192 962 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 CPLX1O14810 134 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 PQBP1O60828 265 aaKnown RBP9.39□□□□□ -0.91
RDH11-205ENST00000553816 EIF5BO60841 1220 aaKnown RBP9.39□□□□□ -0.91
RDH11-205ENST00000553816 ATP9AO75110 1047 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 GGPS1O95749 300 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 GH1P01241 217 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 MMP3P08254 477 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 FDPSP14324 419 aaKnown RBP9.39□□□□□ -0.91
RDH11-205ENST00000553816 ITGB5P18084 799 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 ICAM3P32942 547 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
RDH11-205ENST00000553816 AKAP17AQ02040 695 aaKnown RBP9.39□□□□□ -0.91
RDH11-205ENST00000553816 FAAP100Q0VG06 881 aa9.39□□□□□ -0.91
RDH11-205ENST00000553816 NPY5RQ15761 445 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms