RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 MED15Q96RN5 788 aa11.05□□□□□ -0.64
CFAP54-204ENST00000553778 NOP53Q9NZM5 478 aaKnown RBP11.05□□□□□ -0.64
CFAP54-204ENST00000553778 POLR2AP24928 1970 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 TCRBV5S4A2TA0A5A2 114 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 TMEM88BA6NKF7 163 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 SKAP2O75563 359 aaPredicted RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 RPSAP08865 295 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 PAPOLAP51003 745 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 FOSBP53539 338 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 RHBDL3P58872 404 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 GUCY1A3Q02108 690 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 SPAG1Q07617 926 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 TCP10Q12799 353 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 ITGB3BPQ13352 177 aaPredicted RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 PICALMQ13492 652 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 SH3RF3Q8TEJ3 882 aaPredicted RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 GDAP1L1Q96MZ0 367 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
CFAP54-204ENST00000553778 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 STIM2Q9P246 746 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 PCDHGC5Q9Y5F6 944 aa11.04□□□□□ -0.64
CFAP54-204ENST00000553778 TRAPPC3O43617 180 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ENTPD3O75355 529 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ABL1P00519 1130 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 IMPDH2P12268 514 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 HSPA6P17066 643 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 PEX19P40855 299 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 VAV2P52735 878 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 NFIAQ12857 509 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 CFAP58Q5T655 872 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 CST9Q5W186 159 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 GSPT2Q8IYD1 628 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 CACNA2D3Q8IZS8 1091 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 EIF1ADQ8N9N8 165 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 TSEN2Q8NCE0 465 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 CCT6BQ92526 530 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 RGL1Q9NZL6 768 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 LIMA1Q9UHB6 759 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 REXO2Q9Y3B8 237 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 E7EVH7 732 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ATP1A2P50993 1020 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 NBPF12Q5TAG4 269 aaPredicted RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 LRIG3Q6UXM1 1119 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 RIOK1Q9BRS2 568 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
CFAP54-204ENST00000553778 FAM198AQ9UFP1 575 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 GUCA1BQ9UMX6 200 aa11.03□□□□□ -0.64
CFAP54-204ENST00000553778 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 KIF28PB7ZC32 967 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 ZMYND10O75800 440 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 ANP32DO95626 131 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 TTLL12Q14166 644 aaPredicted RBP11.02□□□□□ -0.65
CFAP54-204ENST00000553778 ACCSLQ4AC99 568 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 RBM12BQ8IXT5 1001 aaKnown RBP11.02□□□□□ -0.65
CFAP54-204ENST00000553778 GALNT15Q8N3T1 639 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 CCDC155Q8N6L0 562 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 APPBP2Q92624 585 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 DTNBP1Q96EV8 351 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 SEC16BQ96JE7 1060 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 SLF1Q9BQI6 1058 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
CFAP54-204ENST00000553778 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
CFAP54-204ENST00000553778 GBA2Q9HCG7 927 aaPredicted RBP11.02□□□□□ -0.65
CFAP54-204ENST00000553778 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 HDAC6Q9UBN7 1215 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 DOCK2Q92608 1830 aa11.02□□□□□ -0.65
CFAP54-204ENST00000553778 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 SYNRGQ9UMZ2 1314 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 ZNF233A6NK53 670 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
CFAP54-204ENST00000553778 SH2B2O14492 632 aaPredicted RBP11.01□□□□□ -0.65
CFAP54-204ENST00000553778 IFIT3O14879 490 aaKnown RBP11.01□□□□□ -0.65
CFAP54-204ENST00000553778 CHGBP05060 677 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 MARCKSP29966 332 aaPredicted RBP11.01□□□□□ -0.65
CFAP54-204ENST00000553778 SEC24CP53992 1094 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 FKBP1BP68106 108 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 PSMD2Q13200 908 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 CUL4BQ13620 913 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 SEPT2Q15019 361 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 CMPK2Q5EBM0 449 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 CCDC122Q5T0U0 273 aa11.01□□□□□ -0.65
CFAP54-204ENST00000553778 GKAP1Q5VSY0 366 aaPredicted RBP11.01□□□□□ -0.65
CFAP54-204ENST00000553778 IFT20Q8IY31 132 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms