RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 DIS3LQ8TF46 1054 aaKnown RBP15.7■□□□□ 0.1
TUBB3-202ENST00000553656 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 GLT1D1Q96MS3 346 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 JPH1Q9HDC5 661 aaPredicted RBP15.7■□□□□ 0.1
TUBB3-202ENST00000553656 PHF24Q9UPV7 400 aa15.7■□□□□ 0.1
TUBB3-202ENST00000553656 NFASCO94856 1347 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 A6NJR5 290 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 IPO5O00410 1097 aaKnown RBP15.69■□□□□ 0.1
TUBB3-202ENST00000553656 ATP9AO75110 1047 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 CABYRO75952 493 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 ASGR1P07306 291 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 MMP3P08254 477 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 ATP2B1P20020 1258 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 CYP3A7P24462 503 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.1
TUBB3-202ENST00000553656 IRX5P78411 483 aaPredicted RBP15.69■□□□□ 0.1
TUBB3-202ENST00000553656 Q4G0T1 1027 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 PPP4R3AQ6IN85 833 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 FERMT2Q96AC1 680 aa15.69■□□□□ 0.1
TUBB3-202ENST00000553656 SENP6Q9GZR1 1112 aaPredicted RBP15.69■□□□□ 0.1
TUBB3-202ENST00000553656 CTAGE5O15320 804 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
TUBB3-202ENST00000553656 TRAPPC10P48553 1259 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
TUBB3-202ENST00000553656 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
TUBB3-202ENST00000553656 CXCL17Q6UXB2 119 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
TUBB3-202ENST00000553656 HTATIP2Q9BUP3 242 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 STARD7Q9NQZ5 370 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 TBC1D22BQ9NU19 505 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 SLC9A2Q9UBY0 812 aa15.68■□□□□ 0.1
TUBB3-202ENST00000553656 A0A1W2PQ45 241 aaPredicted RBP15.67■□□□□ 0.1
TUBB3-202ENST00000553656 A0A1W2PQY0 241 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 KIF28PB7ZC32 967 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 DDX39AO00148 427 aaKnown RBP15.67■□□□□ 0.1
TUBB3-202ENST00000553656 NEMFO60524 1076 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 GAS7O60861 476 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 BAG4O95429 457 aaKnown RBP15.67■□□□□ 0.1
TUBB3-202ENST00000553656 COL6A1P12109 1028 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 SYT1P21579 422 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
TUBB3-202ENST00000553656 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
TUBB3-202ENST00000553656 HSDL1Q3SXM5 330 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 LRCH2Q5VUJ6 765 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 LENG9Q96B70 501 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 MBOAT7Q96N66 472 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
TUBB3-202ENST00000553656 MSH4O15457 936 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 STX6O43752 255 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 SLC37A4O43826 429 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 EDIL3O43854 480 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 MCM7P33993 719 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
TUBB3-202ENST00000553656 KRT76Q01546 638 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 ORC2Q13416 577 aaPredicted RBP15.66■□□□□ 0.1
TUBB3-202ENST00000553656 TTC38Q5R3I4 469 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 SLFN12Q8IYM2 578 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 SEPT1Q8WYJ6 367 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 FAM20AQ96MK3 541 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 RIT2Q99578 217 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 GPR20Q99678 358 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 KATNAL1Q9BW62 490 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 TEKT3Q9BXF9 490 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
TUBB3-202ENST00000553656 ELP1O95163 1332 aa15.66■□□□□ 0.1
TUBB3-202ENST00000553656 TBX3O15119 743 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 ATN1P54259 1190 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-202ENST00000553656 CHMP4BP1P59074 171 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 CALCRLQ16602 461 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 RILPL1Q5EBL4 403 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 SLC5A5Q92911 643 aa15.65■□□□□ 0.1
TUBB3-202ENST00000553656 ZNF215Q9UL58 517 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-202ENST00000553656 A0A0U1RQG5 324 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 ZNF286BP0CG31 522 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 HOXD8P13378 290 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 TCF7P36402 384 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 ACTR2P61160 394 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 ZNF174Q15697 407 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 UTP14CQ5TAP6 766 aaKnown RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 MIS18BP1Q6P0N0 1132 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-202ENST00000553656 ETNPPLQ8TBG4 499 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 AZI2Q9H6S1 392 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 SAMM50Q9Y512 469 aa15.64■□□□□ 0.09
TUBB3-202ENST00000553656 DOCK5Q9H7D0 1870 aa15.63■□□□□ 0.09
TUBB3-202ENST00000553656 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
TUBB3-202ENST00000553656 BACH1O14867 736 aa15.63■□□□□ 0.09
TUBB3-202ENST00000553656 CHMP2AO43633 222 aa15.63■□□□□ 0.09
TUBB3-202ENST00000553656 F2P00734 622 aa15.63■□□□□ 0.09
TUBB3-202ENST00000553656 LGALS2P05162 132 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms