RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 PLA2G4DQ86XP0 818 aa25.97■■□□□ 1.75
TDP1-206ENST00000553569 GIMAP8Q8ND71 665 aaPredicted RBP25.97■■□□□ 1.75
TDP1-206ENST00000553569 PPP1R13LQ8WUF5 828 aa25.97■■□□□ 1.75
TDP1-206ENST00000553569 GRIN2DO15399 1336 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 MROH7Q68CQ1 1323 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 MEIS1O00470 390 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 MAFGO15525 162 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 KRT2P35908 639 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 NONOQ15233 471 aaKnown RBP eCLIP25.96■■□□□ 1.75
TDP1-206ENST00000553569 NIPA1Q7RTP0 329 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 FAM184AQ8NB25 1140 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 UIMC1Q96RL1 719 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 AGO4Q9HCK5 861 aaKnown RBP25.96■■□□□ 1.75
TDP1-206ENST00000553569 BRMS1Q9HCU9 246 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 TELO2Q9Y4R8 837 aa25.96■■□□□ 1.75
TDP1-206ENST00000553569 CCDC194A0A1B0GVG4 234 aa25.95■■□□□ 1.74
TDP1-206ENST00000553569 CDK7P50613 346 aa25.95■■□□□ 1.74
TDP1-206ENST00000553569 GUCY1B3Q02153 619 aa25.95■■□□□ 1.74
TDP1-206ENST00000553569 FAM47CQ5HY64 1035 aa25.95■■□□□ 1.74
TDP1-206ENST00000553569 KRT40Q6A162 431 aa25.95■■□□□ 1.74
TDP1-206ENST00000553569 IGLV3-22A0A075B6J6 115 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 DCDC2CA8MYV0 355 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 MMP1P03956 469 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 CLTBP09497 229 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 HOXD8P13378 290 aaPredicted RBP25.94■■□□□ 1.74
TDP1-206ENST00000553569 INF2Q27J81 1249 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 NBPF20Q3BBV1 942 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 PRR16Q569H4 304 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 ANKRD33Q7Z3H0 272 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 SLC43A3Q8NBI5 491 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 C8orf76Q96K31 380 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 GPR20Q99678 358 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 SDF4Q9BRK5 362 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 PDLIM7Q9NR12 457 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 PRKAG2Q9UGJ0 569 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 DNAH12Q6ZR08 3092 aa25.94■■□□□ 1.74
TDP1-206ENST00000553569 CIITAP33076 1130 aa25.93■■□□□ 1.74
TDP1-206ENST00000553569 SETQ01105 290 aaPredicted RBP25.93■■□□□ 1.74
TDP1-206ENST00000553569 NR5A1Q13285 461 aa25.93■■□□□ 1.74
TDP1-206ENST00000553569 PIK3AP1Q6ZUJ8 805 aa25.93■■□□□ 1.74
TDP1-206ENST00000553569 FAM126BQ8IXS8 530 aa25.93■■□□□ 1.74
TDP1-206ENST00000553569 KAT2BQ92831 832 aa25.93■■□□□ 1.74
TDP1-206ENST00000553569 JPH1Q9HDC5 661 aaPredicted RBP25.93■■□□□ 1.74
TDP1-206ENST00000553569 DDX39AO00148 427 aaKnown RBP25.92■■□□□ 1.74
TDP1-206ENST00000553569 TLR3O15455 904 aaKnown RBP25.92■■□□□ 1.74
TDP1-206ENST00000553569 EDIL3O43854 480 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 PPFIA4O75335 1185 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 LGALS2P05162 132 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 PSEN2P49810 448 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 USP11P51784 963 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 ITGB3BPQ13352 177 aaPredicted RBP25.92■■□□□ 1.74
TDP1-206ENST00000553569 UTP14CQ5TAP6 766 aaKnown RBP25.92■■□□□ 1.74
TDP1-206ENST00000553569 SH3RF1Q7Z6J0 888 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 DIS3L2Q8IYB7 885 aaKnown RBP25.92■■□□□ 1.74
TDP1-206ENST00000553569 TOX2Q96NM4 488 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 KATNAL1Q9BW62 490 aa25.92■■□□□ 1.74
TDP1-206ENST00000553569 NFASCO94856 1347 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 TDP2O95551 362 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 F2P00734 622 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 FAAP100Q0VG06 881 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 MFSD10Q14728 455 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 ZNF577Q9BSK1 485 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 TMEM39AQ9NV64 488 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 SLC9A2Q9UBY0 812 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 CEP290O15078 2479 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 LTBP2Q14767 1821 aa25.91■■□□□ 1.74
TDP1-206ENST00000553569 FAM205CA6NFA0 338 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 BTBD18B2RXH4 712 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 IPO5O00410 1097 aaKnown RBP25.9■■□□□ 1.74
TDP1-206ENST00000553569 KIAA0753Q2KHM9 967 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 LETM2Q2VYF4 491 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 EARS2Q5JPH6 523 aaKnown RBP25.9■■□□□ 1.74
TDP1-206ENST00000553569 NFRKBQ6P4R8 1299 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 TRIM50Q86XT4 487 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 LENG9Q96B70 501 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 C16orf70Q9BSU1 422 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 SEZ6LQ9BYH1 1024 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 TRPV6Q9H1D0 765 aa25.9■■□□□ 1.74
TDP1-206ENST00000553569 TRIM43BA6NCK2 446 aa25.89■■□□□ 1.74
TDP1-206ENST00000553569 B4GALT4O60513 344 aa25.89■■□□□ 1.74
TDP1-206ENST00000553569 TCF7P36402 384 aaPredicted RBP25.89■■□□□ 1.74
TDP1-206ENST00000553569 SAFBQ15424 915 aaKnown RBP eCLIP25.89■■□□□ 1.74
TDP1-206ENST00000553569 TNFRSF25Q93038 417 aa25.89■■□□□ 1.74
TDP1-206ENST00000553569 TRIM43Q96BQ3 446 aaPredicted RBP25.89■■□□□ 1.74
TDP1-206ENST00000553569 GSTTP1A0A1W2PQM5 241 aa25.88■■□□□ 1.73
TDP1-206ENST00000553569 NEK8Q86SG6 692 aa25.88■■□□□ 1.73
TDP1-206ENST00000553569 SEPT1Q8WYJ6 367 aa25.88■■□□□ 1.73
TDP1-206ENST00000553569 TRMT13Q9NUP7 481 aaKnown RBP25.88■■□□□ 1.73
TDP1-206ENST00000553569 HAS3O00219 553 aa25.87■■□□□ 1.73
TDP1-206ENST00000553569 CD4P01730 458 aa25.87■■□□□ 1.73
TDP1-206ENST00000553569 ACTR2P61160 394 aa25.87■■□□□ 1.73
TDP1-206ENST00000553569 MDM2Q00987 491 aaPredicted RBP25.87■■□□□ 1.73
TDP1-206ENST00000553569 C7orf31Q8N865 590 aa25.87■■□□□ 1.73
TDP1-206ENST00000553569 KIF3AQ9Y496 699 aa25.87■■□□□ 1.73
TDP1-206ENST00000553569 H3BRB1 525 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 MSH4O15457 936 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 GJB2P29033 226 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 MAGEA10P43363 369 aaPredicted RBP25.86■■□□□ 1.73
TDP1-206ENST00000553569 CHRDL2Q6WN34 429 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 FBXO18Q8NFZ0 1043 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms