RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 PLEKHA8P1O95397 391 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 CXCL10P02778 98 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 LGALS2P05162 132 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 RXRAP19793 462 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 THPOP40225 353 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 CMTR1Q8N1G2 835 aaKnown RBP14.66□□□□□ -0.06
LINC00643-202ENST00000553426 SRBD1Q8N5C6 995 aaKnown RBP14.66□□□□□ -0.06
LINC00643-202ENST00000553426 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 ATXN2LQ8WWM7 1075 aaKnown RBP14.66□□□□□ -0.06
LINC00643-202ENST00000553426 NEK1Q96PY6 1258 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 EHMT1Q9H9B1 1298 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 THEGQ9P2T0 379 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 CHD7Q9P2D1 2997 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 TTC28Q96AY4 2481 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 RSPH10B2B2RC85 870 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 MEIS2O14770 477 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 NBNO60934 754 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 RSPH10BP0C881 870 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 SMIM10L2AP0DMW4 78 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 SMIM10L2BP0DMW5 78 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 WDR5P61964 334 aaKnown RBP14.65□□□□□ -0.06
LINC00643-202ENST00000553426 ZNF200P98182 395 aaPredicted RBP14.65□□□□□ -0.06
LINC00643-202ENST00000553426 ZNF618Q5T7W0 954 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 SERINC5Q86VE9 423 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 SGMS1Q86VZ5 419 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 MICU3Q86XE3 530 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 MICALL1Q8N3F8 863 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 LRRC2Q9BYS8 371 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 RBM28Q9NW13 759 aaKnown RBP14.65□□□□□ -0.06
LINC00643-202ENST00000553426 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
LINC00643-202ENST00000553426 GBF1Q92538 1859 aa14.65□□□□□ -0.06
LINC00643-202ENST00000553426 LGR5O75473 907 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 KRT32Q14532 448 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 UTP14CQ5TAP6 766 aaKnown RBP14.64□□□□□ -0.07
LINC00643-202ENST00000553426 TMTC3Q6ZXV5 915 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 RAB11FIP4Q86YS3 637 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 ARNTL2Q8WYA1 636 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 GPRASP2Q96D09 838 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 GPR20Q99678 358 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 CERS4Q9HA82 394 aa14.64□□□□□ -0.07
LINC00643-202ENST00000553426 TNFRSF10AO00220 468 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 MAFGO15525 162 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 CAND2O75155 1236 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 CDC45O75419 566 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 MRPS5P82675 430 aaKnown RBP14.63□□□□□ -0.07
LINC00643-202ENST00000553426 FGD1P98174 961 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 SP4Q02446 784 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 TAP1Q03518 808 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 GPNMBQ14956 572 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 SKIV2LQ15477 1246 aaKnown RBP14.63□□□□□ -0.07
LINC00643-202ENST00000553426 TRIM71Q2Q1W2 868 aaKnown RBP14.63□□□□□ -0.07
LINC00643-202ENST00000553426 DHX32Q7L7V1 743 aaKnown RBP14.63□□□□□ -0.07
LINC00643-202ENST00000553426 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 RAD9AQ99638 391 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 RNPEPQ9H4A4 650 aa14.63□□□□□ -0.07
LINC00643-202ENST00000553426 hCG_1642624A0A1W2PR95 340 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 ZBTB43O43298 467 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 GJB5O95377 273 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 AMHP03971 560 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 HMGB1P09429 215 aaKnown RBP14.62□□□□□ -0.07
LINC00643-202ENST00000553426 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 MTMR1Q13613 665 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 RTN1Q16799 776 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 WNT8BQ93098 351 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 BCAS3Q9H6U6 928 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 SETD4Q9NVD3 440 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 TET1Q8NFU7 2136 aa14.62□□□□□ -0.07
LINC00643-202ENST00000553426 TREHO43280 583 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 POU3F3P20264 500 aaPredicted RBP14.61□□□□□ -0.07
LINC00643-202ENST00000553426 HOXC8P31273 242 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 TCF7P36402 384 aaPredicted RBP14.61□□□□□ -0.07
LINC00643-202ENST00000553426 NAPAP54920 295 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 DEFB103AP81534 67 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 UBE2SQ16763 222 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 AAK1Q2M2I8 961 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 TRAF7Q6Q0C0 670 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 APOA5Q6Q788 366 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 SEPT1Q8WYJ6 367 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 SEPT8Q92599 483 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 GLG1Q92896 1179 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 ASB2Q96Q27 587 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 PCDHA6Q9UN73 950 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 PCDHA8Q9Y5H6 950 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 NRCAMQ92823 1304 aa14.61□□□□□ -0.07
LINC00643-202ENST00000553426 XIRP2A4UGR9 3374 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 hCG_1984214I3L0E3 225 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 RFXAPO00287 272 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 FOSP01100 380 aaPredicted RBP14.6□□□□□ -0.07
LINC00643-202ENST00000553426 CTSHP09668 335 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 ARHGAP4P98171 946 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 EXOSC10Q01780 885 aaKnown RBP14.6□□□□□ -0.07
LINC00643-202ENST00000553426 HIC1Q14526 733 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 MBTPS1Q14703 1052 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 TSGA10IPQ3SY00 556 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 PPP1R18Q6NYC8 613 aa14.6□□□□□ -0.07
LINC00643-202ENST00000553426 RSPH3Q86UC2 560 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms