RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
TMEM116-218ENST00000552839 TRANK1O15050 2925 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 NID2Q14112 1375 aa13.07□□□□□ -0.32
TMEM116-218ENST00000552839 MYH6P13533 1939 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 A6NJR5 290 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 ZBTB5O15062 677 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 NKRFO15226 690 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 PTPN11Q06124 597 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 SCRN1Q12765 414 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 BFSP2Q13515 415 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 GPNMBQ14956 572 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 SLC30A10Q6XR72 485 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 WASF1Q92558 559 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 PIGSQ96S52 555 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-218ENST00000552839 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
TMEM116-218ENST00000552839 KPNA6O60684 536 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 LARGE1O95461 756 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 XBP1P17861 261 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 SMARCA1P28370 1054 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 CDC27P30260 824 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 KCNJ6P48051 423 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 DEFB103AP81534 67 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 TRIM29Q14134 588 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-218ENST00000552839 ALYREFQ86V81 257 aaKnown RBP13.05□□□□□ -0.32
TMEM116-218ENST00000552839 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
TMEM116-218ENST00000552839 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-218ENST00000552839 CLEC4DQ8WXI8 215 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 PHKBQ93100 1093 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 CTAGE1Q96RT6 745 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 LMCD1Q9NZU5 365 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 NOD1Q9Y239 953 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
TMEM116-218ENST00000552839 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-218ENST00000552839 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 hCG_1642624A0A1W2PR95 340 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 PPFIA3O75145 1194 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 DEXIO95424 95 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 IFNAR1P17181 557 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 EDNRBP24530 442 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 CALML3P27482 149 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
TMEM116-218ENST00000552839 PDE4DQ08499 809 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 PTGISQ16647 500 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 SNX21Q969T3 373 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 ZBED2Q9BTP6 218 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-218ENST00000552839 UBE2ZQ9H832 354 aaPredicted RBP13.04□□□□□ -0.32
TMEM116-218ENST00000552839 SMC3Q9UQE7 1217 aa13.04□□□□□ -0.32
TMEM116-218ENST00000552839 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 ARIH2O95376 493 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 CD2BP2O95400 341 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 TXNP10599 105 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 NAPAP54920 295 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 GDF6Q6KF10 455 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 FAM178BQ8IXR5 827 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 ZNF713Q8N859 430 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 CAGE1Q8TC20 777 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 AFAP1L1Q8TED9 768 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 CUL5Q93034 780 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 ORC3Q9UBD5 711 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 MRPL11Q9Y3B7 192 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 PCDHA1Q9Y5I3 950 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 ABCB11O95342 1321 aa13.03□□□□□ -0.32
TMEM116-218ENST00000552839 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
TMEM116-218ENST00000552839 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 PRR33A8MZF0 331 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
TMEM116-218ENST00000552839 NBNO60934 754 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 GJB5O95377 273 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 SCG2P13521 617 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 SELPP16109 830 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms