RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 LARGE2Q8N3Y3 721 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ATRIPQ8WXE1 791 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 DNAJC7Q99615 494 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 EHD4Q9H223 541 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 BLZF1Q9H2G9 400 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 COL2A1P02458 1487 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 PPP1R37O75864 691 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 FAM107AO95990 144 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 LSP1P33241 339 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 NAA35Q5VZE5 725 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ZFPM1Q8IX07 1006 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 MREGQ8N565 214 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 NUP58Q9BVL2 599 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 DISC1Q9NRI5 854 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 SAMM50Q9Y512 469 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 PP2D1A8MPX8 630 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 VIL1P09327 827 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 TCP1P17987 556 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 STAT6P42226 847 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 VAV2P52735 878 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 COPB1P53618 953 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 ICA1Q05084 483 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 KRT31Q15323 416 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 PTGISQ16647 500 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 KLHL10Q6JEL2 608 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 NIM1KQ8IY84 436 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 TRIM58Q8NG06 486 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 CCSER1Q9C0I3 900 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 RMND1Q9NWS8 449 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
TUBA1C-209ENST00000552448 CDK17Q00537 523 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 MEA1Q16626 185 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 RNF187Q5TA31 235 aaPredicted RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 FAXDC2Q96IV6 333 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 CD248Q9HCU0 757 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 SLC40A1Q9NP59 571 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 CAPN11Q9UMQ6 739 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 REXO2Q9Y3B8 237 aaKnown RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 H7C1D1 291 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 SCP2P22307 547 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 UBA7P41226 1012 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 RBM5P52756 815 aaKnown RBP eCLIP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 STX17P56962 302 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 ORC2Q13416 577 aaPredicted RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 PPP2R5AQ15172 486 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 TCP11X2Q5H9J9 407 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 C6orf89Q6UWU4 347 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 NLRP14Q86W24 1093 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 IFT20Q8IY31 132 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 AGBL3Q8NEM8 1001 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 TBCKQ8TEA7 893 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 CCDC114Q96M63 670 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 AK8Q96MA6 479 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms