RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NBPF20Q3BBV1 942 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 NIPA1Q7RTP0 329 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 KRT25Q7Z3Z0 450 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 PLA2G4DQ86XP0 818 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 FAM126BQ8IXS8 530 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 LLPHQ9BRT6 129 aaKnown RBP21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 PHF20Q9BVI0 1012 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 DOCK5Q9H7D0 1870 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 GRIN2DO15399 1336 aa21.03■□□□□ 0.96
PRPF40B-216ENST00000552301 CCDC194A0A1B0GVG4 234 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 MEIS1O00470 390 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 HOXD8P13378 290 aaPredicted RBP21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 RAG1P15918 1043 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 MAGEA10P43363 369 aaPredicted RBP21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 FOSBP53539 338 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 HMGN5P82970 282 aaKnown RBP21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 FAAP100Q0VG06 881 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 ST3GAL1Q11201 340 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 NFRKBQ6P4R8 1299 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 CYP2W1Q8TAV3 490 aa21.02■□□□□ 0.96
PRPF40B-216ENST00000552301 KIAA0355O15063 1070 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 ATP9AO75110 1047 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 F2P00734 622 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 FDPSP14324 419 aaKnown RBP21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 MCM2P49736 904 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 PSEN2P49810 448 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 MDM2Q00987 491 aaPredicted RBP21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 PTPN11Q06124 597 aaPredicted RBP21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 MFSD10Q14728 455 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 NONOQ15233 471 aaKnown RBP eCLIP21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 SH3RF1Q7Z6J0 888 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 TBCKQ8TEA7 893 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 CRYGNQ8WXF5 182 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 GPR20Q99678 358 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 BCAS3Q9H6U6 928 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 JPH1Q9HDC5 661 aaPredicted RBP21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 TCEAL9Q9UHQ7 104 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 NOD1Q9Y239 953 aa21.01■□□□□ 0.95
PRPF40B-216ENST00000552301 FAM86B1E9PN63 330 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 LGALS2P05162 132 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 FAM86B2P0C5J1 330 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 SUPT20HL2P0C7V6 817 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 ARP10275 920 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 KRT2P35908 639 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 NPY5RQ15761 445 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 KIAA0753Q2KHM9 967 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 PRR16Q569H4 304 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 UTP14CQ5TAP6 766 aaKnown RBP21■□□□□ 0.95
PRPF40B-216ENST00000552301 C7orf31Q8N865 590 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 FAM184AQ8NB25 1140 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 KAT2BQ92831 832 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 AGO4Q9HCK5 861 aaKnown RBP21■□□□□ 0.95
PRPF40B-216ENST00000552301 GJB4Q9NTQ9 266 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 SLC9A2Q9UBY0 812 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 ZNF215Q9UL58 517 aaPredicted RBP21■□□□□ 0.95
PRPF40B-216ENST00000552301 NFASCO94856 1347 aa21■□□□□ 0.95
PRPF40B-216ENST00000552301 TRIM43BA6NCK2 446 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 B4GALT4O60513 344 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 USP11P51784 963 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 SEPT1Q8WYJ6 367 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 TRIM43Q96BQ3 446 aaPredicted RBP20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 TRPV6Q9H1D0 765 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 TBX21Q9UL17 535 aa20.99■□□□□ 0.95
PRPF40B-216ENST00000552301 M0R2N6 131 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 CD4P01730 458 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 CIITAP33076 1130 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 TCF7P36402 384 aaPredicted RBP20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 PPP1R13LQ8WUF5 828 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 GDF15Q99988 308 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 ZNF577Q9BSK1 485 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 PPP1R12CQ9BZL4 782 aa20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 UBE2OQ9C0C9 1292 aaKnown RBP20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 TRMT13Q9NUP7 481 aaKnown RBP20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 COLQQ9Y215 455 aaPredicted RBP20.98■□□□□ 0.95
PRPF40B-216ENST00000552301 IGLV3-22A0A075B6J6 115 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 H3BRB1 525 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 IPO5O00410 1097 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 INF2Q27J81 1249 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 KRT40Q6A162 431 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 SESTD1Q86VW0 696 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 BADQ92934 168 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 C8orf76Q96K31 380 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 C16orf70Q9BSU1 422 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 HIPK3Q9H422 1215 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 TUT1Q9H6E5 874 aaKnown RBP20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 PCDH10Q9P2E7 1040 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 KIF3AQ9Y496 699 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 LTBP2Q14767 1821 aa20.97■□□□□ 0.95
PRPF40B-216ENST00000552301 HAS3O00219 553 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 TIMP1P01033 207 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 MMP1P03956 469 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 ITGB3BPQ13352 177 aaPredicted RBP20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 PIK3AP1Q6ZUJ8 805 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 TRIM50Q86XT4 487 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 OXER1Q8TDS5 423 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 GLG1Q92896 1179 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 TMX3Q96JJ7 454 aa20.96■□□□□ 0.95
PRPF40B-216ENST00000552301 AZI2Q9H6S1 392 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms