RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 APOL5Q9BWW9 433 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 ISY1Q9ULR0 285 aaKnown RBP12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 SYNPO2Q9UMS6 1093 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 MRPL42Q9Y6G3 142 aaKnown RBP12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 R4GN57 208 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 GSG1L2A8MUP6 293 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 GH1P01241 217 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 CTSHP09668 335 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 TRIM27P14373 513 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 SLC1A4P43007 532 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 RARSP54136 660 aaKnown RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 IKQ13123 557 aaPredicted RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 KCNC3Q14003 757 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 TTBK2Q6IQ55 1244 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 SYCE2Q6PIF2 218 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 AMOTL1Q8IY63 956 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 POF1BQ8WVV4 589 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 SORCS3Q9UPU3 1222 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 CACNA1IQ9P0X4 2223 aa12.13□□□□□ -0.47
SLC48A1-209ENST00000552003 MINDY4BA8MYZ0 360 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 C2CD4DB7Z1M9 353 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 ZZEF1O43149 2961 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 ASGR2P07307 311 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 HOXC8P31273 242 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 SLC16A2P36021 539 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 RPS6P62753 249 aaKnown RBP12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 DGKDQ16760 1214 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 RCSD1Q6JBY9 416 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 UBALD2Q8IYN6 164 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 NEDD1Q8NHV4 660 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 P2RX5Q93086 422 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 PLVAPQ9BX97 442 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 EXOC6BQ9Y2D4 811 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 RWDD3Q9Y3V2 267 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 SPEGQ15772 3267 aa12.12□□□□□ -0.47
SLC48A1-209ENST00000552003 TREHO43280 583 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 DGKIO75912 1065 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 ATXN1P54253 815 aaKnown RBP12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 RNF207Q6ZRF8 634 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 DTWD2Q8NBA8 298 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 TBC1D5Q92609 795 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
SLC48A1-209ENST00000552003 ENPP3O14638 875 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 AOC1P19801 751 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 ERVFC1P60507 584 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 UBE3CQ15386 1083 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 FLCNQ8NFG4 579 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 FEZF2Q8TBJ5 459 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 LINC01599Q8WXQ3 324 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 TLE6Q9H808 572 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 COL20A1Q9P218 1284 aa12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
SLC48A1-209ENST00000552003 NMT2O60551 498 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 DUSP6Q16828 381 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 TMEM184AQ6ZMB5 413 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 C16orf70Q9BSU1 422 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 POMKQ9H5K3 350 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 TSHZ2Q9NRE2 1034 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 IL17RBQ9NRM6 502 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 PAG1Q9NWQ8 432 aa12.09□□□□□ -0.47
SLC48A1-209ENST00000552003 CEP295Q9C0D2 2601 aa12.08□□□□□ -0.47
SLC48A1-209ENST00000552003 SORBS3O60504 671 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 CHRNA1P02708 482 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 GATMP50440 423 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 TFAP4Q01664 338 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 HSDL1Q3SXM5 330 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 BTNL9Q6UXG8 535 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 RTN4RL1Q86UN2 441 aaPredicted RBP12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms