RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MYL3P08590 195 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 SUPT20HL2P0C7V6 817 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 TRIM27P14373 513 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 KCNJ6P48051 423 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 ATP8B2P98198 1209 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 KLRC3Q07444 240 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 PLA2G4EQ3MJ16 856 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 C12orf60Q5U649 245 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 LYPD4Q6UWN0 246 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 C16orf86Q6ZW13 317 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 TMCO2Q7Z6W1 182 aaPredicted RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 AACSQ86V21 672 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 FBXO16Q8IX29 292 aaPredicted RBP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 AMOTL1Q8IY63 956 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 TSC1Q92574 1164 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 ARHGAP45Q92619 1136 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 SPOCK3Q9BQ16 436 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
HOXB3-213ENST00000552000 KCNH6Q9H252 994 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 C1orf115Q9H7X2 142 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 SLC38A10Q9HBR0 1119 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 GPR179Q6PRD1 2367 aa6.43□□□□□ -1.38
HOXB3-213ENST00000552000 LCTP09848 1927 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 DCHS1Q96JQ0 3298 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 ANKRD11Q6UB99 2663 aaPredicted RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 H3BQ06 376 aaPredicted RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 GOLIM4O00461 696 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 IQCF3P0C7M6 154 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 RFC2P35250 354 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 TTF1Q15361 905 aaPredicted RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 NBPF20Q3BBV1 942 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 IQSEC1Q6DN90 963 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 TAPT1Q6NXT6 567 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 HFE2Q6ZVN8 426 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 TRMT2AQ8IZ69 625 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 STK11IPQ8N1F8 1099 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 FRAT1Q92837 279 aaPredicted RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 TGS1Q96RS0 853 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 DNAJC2Q99543 621 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 ACAD9Q9H845 621 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 SUGCTQ9HAC7 445 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 A1CFQ9NQ94 594 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 ATP8A2Q9NTI2 1148 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 RNF146Q9NTX7 359 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 COG6Q9Y2V7 657 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 NOP58Q9Y2X3 529 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 FASNP49327 2511 aaKnown RBP6.42□□□□□ -1.38
HOXB3-213ENST00000552000 DMXL1Q9Y485 3027 aa6.42□□□□□ -1.38
HOXB3-213ENST00000552000 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 LINC01553A4QN01 128 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 IPO8O15397 1037 aaKnown RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 BAIAP3O94812 1187 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CELA2BP08218 269 aaPredicted RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 ERVK-21P61565 698 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 WDR5P61964 334 aaKnown RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 DEFB103AP81534 67 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 ZP2Q05996 745 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CBLBQ13191 982 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 PPP1R26Q5T8A7 1209 aaPredicted RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 FAM117BQ6P1L5 589 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CTR9Q6PD62 1173 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 KIAA1211Q6ZU35 1233 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 TMEM57Q8N5G2 664 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CHMP4CQ96CF2 233 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CRBNQ96SW2 442 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 MTG1Q9BT17 334 aaPredicted RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 IL1RAPL2Q9NP60 686 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 VTA1Q9NP79 307 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
HOXB3-213ENST00000552000 POLR3EQ9NVU0 708 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 NYAP2Q9P242 653 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 CLIP2Q9UDT6 1046 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 FEM1BQ9UK73 627 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 NOD1Q9Y239 953 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 EXOC6BQ9Y2D4 811 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 Q9Y3F1 56 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 MYO15AQ9UKN7 3530 aa6.41□□□□□ -1.38
HOXB3-213ENST00000552000 DMDP11532 3685 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 GJB5O95377 273 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 CHGBP05060 677 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 ALAS1P13196 640 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 RASA1P20936 1047 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 ADD2P35612 726 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 OAZ1P54368 228 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 CHMP4BP1P59074 171 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 PURAQ00577 322 aaKnown RBP6.4□□□□□ -1.38
HOXB3-213ENST00000552000 BFSP2Q13515 415 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 DUSP28Q4G0W2 176 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 NSMFQ6X4W1 530 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms