RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 NAP1L4Q99733 375 aaKnown RBP21.19■□□□□ 0.98
DDX54-209ENST00000551912 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
DDX54-209ENST00000551912 POLR3EQ9NVU0 708 aa21.19■□□□□ 0.98
DDX54-209ENST00000551912 DNAH12Q6ZR08 3092 aa21.19■□□□□ 0.98
DDX54-209ENST00000551912 A0A1W2PQ45 241 aaPredicted RBP21.18■□□□□ 0.98
DDX54-209ENST00000551912 A0A1W2PQY0 241 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 NOP56O00567 594 aaKnown RBP21.18■□□□□ 0.98
DDX54-209ENST00000551912 KPNA6O60684 536 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 TDP2O95551 362 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 MMP3P08254 477 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
DDX54-209ENST00000551912 Q4G0T1 1027 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 PPP4R3AQ6IN85 833 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 NOSTRINQ8IVI9 506 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 LENG9Q96B70 501 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 GLT1D1Q96MS3 346 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 ZNF577Q9BSK1 485 aa21.18■□□□□ 0.98
DDX54-209ENST00000551912 IPO5O00410 1097 aaKnown RBP21.17■□□□□ 0.98
DDX54-209ENST00000551912 CCNT1O60563 726 aaKnown RBP21.17■□□□□ 0.98
DDX54-209ENST00000551912 CABYRO75952 493 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 MYL3P08590 195 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 U2AF2P26368 475 aaKnown RBP eCLIP21.17■□□□□ 0.98
DDX54-209ENST00000551912 DGKDQ16760 1214 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 HSDL1Q3SXM5 330 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 MCTP1Q6DN14 999 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 CXCL17Q6UXB2 119 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 MBOAT7Q96N66 472 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 DDX25Q9UHL0 483 aaKnown RBP21.17■□□□□ 0.98
DDX54-209ENST00000551912 NFASCO94856 1347 aa21.17■□□□□ 0.98
DDX54-209ENST00000551912 KIF28PB7ZC32 967 aa21.16■□□□□ 0.98
DDX54-209ENST00000551912 PURAQ00577 322 aaKnown RBP21.16■□□□□ 0.98
DDX54-209ENST00000551912 SP4Q02446 784 aa21.16■□□□□ 0.98
DDX54-209ENST00000551912 ITGB3BPQ13352 177 aaPredicted RBP21.16■□□□□ 0.98
DDX54-209ENST00000551912 VTI1AQ96AJ9 217 aa21.16■□□□□ 0.98
DDX54-209ENST00000551912 JPH1Q9HDC5 661 aaPredicted RBP21.16■□□□□ 0.98
DDX54-209ENST00000551912 STARD7Q9NQZ5 370 aa21.16■□□□□ 0.98
DDX54-209ENST00000551912 ELP1O95163 1332 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 MSH4O15457 936 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 PPFIA4O75335 1185 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 HOXD8P13378 290 aaPredicted RBP21.15■□□□□ 0.98
DDX54-209ENST00000551912 BECN1Q14457 450 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 UIMC1Q96RL1 719 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 GPR20Q99678 358 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 MTG1Q9BT17 334 aaPredicted RBP21.15■□□□□ 0.98
DDX54-209ENST00000551912 HTATIP2Q9BUP3 242 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 TBC1D22BQ9NU19 505 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 SLC9A2Q9UBY0 812 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 DOCK5Q9H7D0 1870 aa21.15■□□□□ 0.98
DDX54-209ENST00000551912 SLC37A4O43826 429 aa21.14■□□□□ 0.97
DDX54-209ENST00000551912 ATN1P54259 1190 aaPredicted RBP21.14■□□□□ 0.97
DDX54-209ENST00000551912 NOL7Q9UMY1 257 aaKnown RBP21.14■□□□□ 0.97
DDX54-209ENST00000551912 VPS37CA5D8V6 355 aaPredicted RBP21.13■□□□□ 0.97
DDX54-209ENST00000551912 DHX15O43143 795 aaKnown RBP21.13■□□□□ 0.97
DDX54-209ENST00000551912 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 SYT1P21579 422 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 SLC39A5Q6ZMH5 540 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 SLC5A5Q92911 643 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 RIT2Q99578 217 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 TCEAL9Q9UHQ7 104 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
DDX54-209ENST00000551912 A0A0U1RQG5 324 aaPredicted RBP21.12■□□□□ 0.97
DDX54-209ENST00000551912 DDX39AO00148 427 aaKnown RBP21.12■□□□□ 0.97
DDX54-209ENST00000551912 TRAPPC10P48553 1259 aa21.12■□□□□ 0.97
DDX54-209ENST00000551912 LRCH2Q5VUJ6 765 aa21.12■□□□□ 0.97
DDX54-209ENST00000551912 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
DDX54-209ENST00000551912 ETNPPLQ8TBG4 499 aa21.12■□□□□ 0.97
DDX54-209ENST00000551912 GSTTP1A0A1W2PQM5 241 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 WNT7AO00755 349 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 NEMFO60524 1076 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 GAS7O60861 476 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 LGALS2P05162 132 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 ZNF286BP0CG31 522 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 TCF7P36402 384 aaPredicted RBP21.11■□□□□ 0.97
DDX54-209ENST00000551912 ACTR2P61160 394 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 PSMC6P62333 389 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 MLLT1Q03111 559 aaPredicted RBP21.11■□□□□ 0.97
DDX54-209ENST00000551912 ITGA7Q13683 1181 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 SNX17Q15036 470 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 LRRC26Q2I0M4 334 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 C1orf53Q5VUE5 145 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 POTEDQ86YR6 584 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 FAM20AQ96MK3 541 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 KATNAL1Q9BW62 490 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 KCNMB3Q9NPA1 279 aa21.11■□□□□ 0.97
DDX54-209ENST00000551912 TBX3O15119 743 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 MARCH6O60337 910 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 CCNE2O96020 404 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 F2P00734 622 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 KRT76Q01546 638 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 TTC38Q5R3I4 469 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 ZNF746Q6NUN9 644 aaPredicted RBP21.1■□□□□ 0.97
DDX54-209ENST00000551912 KAT2BQ92831 832 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 GJA10Q969M2 543 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 TEKT3Q9BXF9 490 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 SEZ6LQ9BYH1 1024 aa21.1■□□□□ 0.97
DDX54-209ENST00000551912 SCN10AQ9Y5Y9 1956 aa21.09■□□□□ 0.97
DDX54-209ENST00000551912 ARVCFO00192 962 aa21.09■□□□□ 0.97
DDX54-209ENST00000551912 STX6O43752 255 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms