RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MCM7P33993 719 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 GJA8P48165 433 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 SETQ01105 290 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 CCSAPQ6IQ19 270 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 CYFIP1Q7L576 1253 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 TLK2Q86UE8 772 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 OR6J1Q8NGC5 347 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 EMID1Q96A84 441 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 MTMR9Q96QG7 549 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 PSMD10O75832 226 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 FARP2O94887 1054 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 SLC34A2O95436 690 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 BEX3Q00994 111 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 NEDD9Q14511 834 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 LRRC41Q15345 812 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 RILPL1Q5EBL4 403 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 B3GNT9Q6UX72 402 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 DHX37Q8IY37 1157 aaKnown RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 AFG1LQ8WV93 481 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 NAP1L4Q99733 375 aaKnown RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 ZNF577Q9BSK1 485 aa14.78□□□□□ -0.04
RAB5C-206ENST00000550406 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 NOL7Q9UMY1 257 aaKnown RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
RAB5C-206ENST00000550406 GSTTP1A0A1W2PQM5 241 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 A6NJR5 290 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 CCNE2O96020 404 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 EN2P19622 333 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-206ENST00000550406 LAMC2Q13753 1193 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 HSDL1Q3SXM5 330 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 METTL7BQ6UX53 244 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 IPO9Q96P70 1041 aaKnown RBP14.77□□□□□ -0.05
RAB5C-206ENST00000550406 TMEM106CQ9BVX2 250 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
RAB5C-206ENST00000550406 AP5M1Q9H0R1 490 aa14.77□□□□□ -0.05
RAB5C-206ENST00000550406 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 TBX3O15119 743 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 NEMFO60524 1076 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 C6orf222P0C671 652 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 HOXD8P13378 290 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 CST5P28325 142 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 FSCN1Q16658 493 aaKnown RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 GIMAP8Q8ND71 665 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-206ENST00000550406 CHAMP1Q96JM3 812 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 FAM20AQ96MK3 541 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 RIT2Q99578 217 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 GPR20Q99678 358 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 MLXIPQ9HAP2 919 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 SLC9A2Q9UBY0 812 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 VAV3Q9UKW4 847 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 CLIC4Q9Y696 253 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 BRCA2P51587 3418 aa14.76□□□□□ -0.05
RAB5C-206ENST00000550406 SCN10AQ9Y5Y9 1956 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 ATG7O95352 703 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 MMP3P08254 477 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 PTGDRQ13258 359 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 ORC2Q13416 577 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-206ENST00000550406 PTPAQ15257 358 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 KCNA10Q16322 511 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 IL17AQ16552 155 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 CALCRLQ16602 461 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 LRCH2Q5VUJ6 765 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 ARRDC4Q8NCT1 418 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 PPTC7Q8NI37 304 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 SPATA33Q96N06 139 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 USP28Q96RU2 1077 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 UNC45AQ9H3U1 944 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 JPH1Q9HDC5 661 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-206ENST00000550406 TBC1D22BQ9NU19 505 aa14.75□□□□□ -0.05
RAB5C-206ENST00000550406 EML1O00423 815 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 ACTR2P61160 394 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 SP4Q02446 784 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 SF3A1Q15459 793 aaKnown RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 FOXD4L6Q3SYB3 417 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 ABHD15Q6UXT9 468 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 FOXD4L3Q6VB84 417 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 DIS3LQ8TF46 1054 aaKnown RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 PCYT2Q99447 389 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 SDF4Q9BRK5 362 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 TFIP11Q9UBB9 837 aaKnown RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 DAXXQ9UER7 740 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-206ENST00000550406 ALPK3Q96L96 1907 aa14.74□□□□□ -0.05
RAB5C-206ENST00000550406 TRIP12Q14669 1992 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-206ENST00000550406 IGKV6D-21A0A0A0MT36 114 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 CCDC85CA6NKD9 419 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 DNM1LO00429 736 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 GAS7O60861 476 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-206ENST00000550406 ASGR1P07306 291 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 OR52Z1P0C646 297 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 TXKP42681 527 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 SOX10P56693 466 aa14.73□□□□□ -0.05
RAB5C-206ENST00000550406 ATP2C1P98194 919 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms