RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 MREGQ8N565 214 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 ABCF3Q9NUQ8 709 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 FAM205AQ6ZU69 1335 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
VDR-208ENST00000550325 MAGEB6P1A0A0J9YX57 407 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 CNNM4Q6P4Q7 775 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 ZNF572Q7Z3I7 529 aaPredicted RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 UTP11Q9Y3A2 253 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 A0A087X0T9 212 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 A0A1W2PQJ5 194 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 PDHA1P08559 390 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 FAM228BP0C875 321 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 SLC8A3P57103 927 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 CCDC25Q86WR0 208 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 TRIM9Q9C026 710 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.25□□□□□ -0.29
VDR-208ENST00000550325 LTN1O94822 1766 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
VDR-208ENST00000550325 DNAJC8O75937 253 aaPredicted RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 GNAT2P19087 354 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 TXKP42681 527 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 CDK17Q00537 523 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 EVX2Q03828 476 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 PUM3Q15397 648 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 TAF11Q15544 211 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 PEX26Q7Z412 305 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 RNF10Q8N5U6 811 aaKnown RBP13.25□□□□□ -0.29
VDR-208ENST00000550325 AZI2Q9H6S1 392 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
VDR-208ENST00000550325 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
VDR-208ENST00000550325 RGS16O15492 202 aaPredicted RBP13.24□□□□□ -0.29
VDR-208ENST00000550325 ADCY1Q08828 1119 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 CUL1Q13616 776 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 RBBP5Q15291 538 aaKnown RBP13.24□□□□□ -0.29
VDR-208ENST00000550325 SEC23AQ15436 765 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 NPY5RQ15761 445 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 ARMC9Q7Z3E5 817 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
VDR-208ENST00000550325 UBOX5O94941 541 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 PCK1P35558 622 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 PLTPP55058 493 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 AMPD3Q01432 767 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 TRPM8Q7Z2W7 1104 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 ANKRD42Q8N9B4 389 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 TSG101Q99816 390 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 MARCH6O60337 910 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 SMIM24O75264 130 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 KRT13P13646 458 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
VDR-208ENST00000550325 TNFRSF25Q93038 417 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 IRAK4Q9NWZ3 460 aa13.24□□□□□ -0.29
VDR-208ENST00000550325 GRID2IPA4D2P6 1211 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 USP17L21D6R901 530 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 PGRMC1O00264 195 aaKnown RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 CALML3P27482 149 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 ALDH5A1P51649 535 aaPredicted RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 ERICH1Q86X53 443 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 ZBTB38Q8NAP3 1195 aaPredicted RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 SHBGP04278 402 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 TROAPQ12815 778 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 NAB2Q15742 525 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 ASIC2Q16515 512 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 MEI1Q5TIA1 1274 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 LRRC15Q8TF66 581 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 CPVLQ9H3G5 476 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 KCNK9Q9NPC2 374 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 FGFR1OPO95684 399 aaKnown RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 CALM1P0DP23 149 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 CALM2P0DP24 149 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 CALM3P0DP25 149 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 KIF5BP33176 963 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms