RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 RSPH10B2B2RC85 870 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 H3BRB1 525 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 HIP1O00291 1037 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 EFCAB14O75071 495 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 LINC00271P0C7V0 271 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 RSPH10BP0C881 870 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 ANTXR2P58335 489 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 ADAM17P78536 824 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 TUT1Q9H6E5 874 aaKnown RBP13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 CTNNA3Q9UI47 895 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
SMARCD1-208ENST00000550280 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 C17orf102A2RUQ5 167 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 GCOM1H8Y6P7 765 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 CTSHP09668 335 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 POLR2MP0CAP2 368 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 TGFB3P10600 412 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 IL9P15248 144 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 CCND2P30279 289 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 ICAM3P32942 547 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 AAMPQ13685 434 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 LEXMQ3ZCV2 418 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 KCNV1Q6PIU1 500 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 ATP6V0A1Q93050 837 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 GPR20Q99678 358 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 INSL6Q9Y581 213 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 COL4A6Q14031 1691 aa13.42□□□□□ -0.26
SMARCD1-208ENST00000550280 EMSYQ7Z589 1322 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 SPATA31C2B4DYI2 1134 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 PI4K2BG5E9Z4 385 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 KCNA5P22460 613 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 TOP1MTQ969P6 601 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 MLXIPQ9HAP2 919 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 BAZ2BQ9UIF8 2168 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-208ENST00000550280 IFIT3O14879 490 aaKnown RBP13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 GPR37L1O60883 481 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 AMHP03971 560 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 COL19A1Q14993 1142 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 METTL7BQ6UX53 244 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
SMARCD1-208ENST00000550280 E7EWF7 191 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 H3BNC9 293 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 MEIS2O14770 477 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 CHMLP26374 656 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 RC3H2Q9HBD1 1191 aaKnown RBP13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
SMARCD1-208ENST00000550280 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 H3BQ06 376 aaPredicted RBP13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 ATP9AO75110 1047 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 CAND2O75155 1236 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 UPP2O95045 317 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 CHRNA1P02708 482 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 MGAT3Q09327 533 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 TMEM192Q8IY95 271 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 SEPT8Q92599 483 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
SMARCD1-208ENST00000550280 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 FIBPO43427 364 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 LTBRP36941 435 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 SP4Q02446 784 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 GPM6BQ13491 265 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 NEDD9Q14511 834 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 WTAPQ15007 396 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 UTP14CQ5TAP6 766 aaKnown RBP13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 GJD3Q8N144 294 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 ARIH1Q9Y4X5 557 aaPredicted RBP13.37□□□□□ -0.27
SMARCD1-208ENST00000550280 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 SGSM2O43147 1006 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms