RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PURAQ00577 322 aaKnown RBP25.62■■□□□ 1.69
BRF1-216ENST00000550208 PRR16Q569H4 304 aa25.62■■□□□ 1.69
BRF1-216ENST00000550208 GIMAP8Q8ND71 665 aaPredicted RBP25.62■■□□□ 1.69
BRF1-216ENST00000550208 K7ELQ4 463 aaPredicted RBP25.61■■□□□ 1.69
BRF1-216ENST00000550208 CABYRO75952 493 aa25.61■■□□□ 1.69
BRF1-216ENST00000550208 PSMC6P62333 389 aa25.61■■□□□ 1.69
BRF1-216ENST00000550208 SAFBQ15424 915 aaKnown RBP eCLIP25.61■■□□□ 1.69
BRF1-216ENST00000550208 DGKDQ16760 1214 aa25.61■■□□□ 1.69
BRF1-216ENST00000550208 MTG1Q9BT17 334 aaPredicted RBP25.61■■□□□ 1.69
BRF1-216ENST00000550208 DOCK5Q9H7D0 1870 aa25.61■■□□□ 1.69
BRF1-216ENST00000550208 PPFIA4O75335 1185 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 RTP1P59025 263 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 SP4Q02446 784 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 ITGB3BPQ13352 177 aaPredicted RBP25.6■■□□□ 1.69
BRF1-216ENST00000550208 LENG9Q96B70 501 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 GPR20Q99678 358 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 GRIN2DO15399 1336 aa25.6■■□□□ 1.69
BRF1-216ENST00000550208 CYP3A7-CYP3A51PA0A087WV96 503 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 TDP2O95551 362 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 CYP3A7P24462 503 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 SNX17Q15036 470 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 LETM2Q2VYF4 491 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 ATP11BQ9Y2G3 1177 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 KIF3AQ9Y496 699 aa25.59■■□□□ 1.69
BRF1-216ENST00000550208 A0A0U1RQG5 324 aaPredicted RBP25.58■■□□□ 1.69
BRF1-216ENST00000550208 NOP56O00567 594 aaKnown RBP25.58■■□□□ 1.69
BRF1-216ENST00000550208 EVI5O60447 810 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 HOXD8P13378 290 aaPredicted RBP25.58■■□□□ 1.69
BRF1-216ENST00000550208 CDK7P50613 346 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 ITGA7Q13683 1181 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 TRIM60Q495X7 471 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 Q4G0T1 1027 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 C1orf53Q5VUE5 145 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 NEK8Q86SG6 692 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 PPP1R13LQ8WUF5 828 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 KAT2BQ92831 832 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 MBOAT7Q96N66 472 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 SDF4Q9BRK5 362 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 ZNF577Q9BSK1 485 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 ALPK3Q96L96 1907 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 NFASCO94856 1347 aa25.58■■□□□ 1.69
BRF1-216ENST00000550208 GSTTP1A0A1W2PQM5 241 aa25.57■■□□□ 1.68
BRF1-216ENST00000550208 ARVCFO00192 962 aa25.57■■□□□ 1.68
BRF1-216ENST00000550208 MSH4O15457 936 aa25.57■■□□□ 1.68
BRF1-216ENST00000550208 DHX15O43143 795 aaKnown RBP25.57■■□□□ 1.68
BRF1-216ENST00000550208 SETQ01105 290 aaPredicted RBP25.57■■□□□ 1.68
BRF1-216ENST00000550208 C7orf61Q8IZ16 206 aa25.57■■□□□ 1.68
BRF1-216ENST00000550208 FOXD4L1Q9NU39 408 aa25.57■■□□□ 1.68
BRF1-216ENST00000550208 MKI67P46013 3256 aaKnown RBP25.57■■□□□ 1.68
BRF1-216ENST00000550208 IPO5O00410 1097 aaKnown RBP25.56■■□□□ 1.68
BRF1-216ENST00000550208 CHMP4BP1P59074 171 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 TLE2Q04725 743 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 NBPF20Q3BBV1 942 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 MOXD1Q6UVY6 613 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 HSCBQ8IWL3 235 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 SLC43A3Q8NBI5 491 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 SEPT1Q8WYJ6 367 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 FOXP1Q9H334 677 aaPredicted RBP25.56■■□□□ 1.68
BRF1-216ENST00000550208 JPH1Q9HDC5 661 aaPredicted RBP25.56■■□□□ 1.68
BRF1-216ENST00000550208 SLC9A2Q9UBY0 812 aa25.56■■□□□ 1.68
BRF1-216ENST00000550208 KIF28PB7ZC32 967 aa25.55■■□□□ 1.68
BRF1-216ENST00000550208 DDX39AO00148 427 aaKnown RBP25.55■■□□□ 1.68
BRF1-216ENST00000550208 ZNF286BP0CG31 522 aa25.55■■□□□ 1.68
BRF1-216ENST00000550208 UTP14CQ5TAP6 766 aaKnown RBP25.55■■□□□ 1.68
BRF1-216ENST00000550208 LARP1BQ659C4 914 aaKnown RBP25.55■■□□□ 1.68
BRF1-216ENST00000550208 GJA10Q969M2 543 aa25.55■■□□□ 1.68
BRF1-216ENST00000550208 C16orf70Q9BSU1 422 aa25.55■■□□□ 1.68
BRF1-216ENST00000550208 DDX25Q9UHL0 483 aaKnown RBP25.55■■□□□ 1.68
BRF1-216ENST00000550208 CCNT1O60563 726 aaKnown RBP25.54■■□□□ 1.68
BRF1-216ENST00000550208 PQBP1O60828 265 aaKnown RBP25.54■■□□□ 1.68
BRF1-216ENST00000550208 LGALS2P05162 132 aa25.54■■□□□ 1.68
BRF1-216ENST00000550208 PSEN2P49810 448 aa25.54■■□□□ 1.68
BRF1-216ENST00000550208 PPP4R3AQ6IN85 833 aa25.54■■□□□ 1.68
BRF1-216ENST00000550208 INTS4Q96HW7 963 aaKnown RBP25.54■■□□□ 1.68
BRF1-216ENST00000550208 TBC1D22BQ9NU19 505 aa25.54■■□□□ 1.68
BRF1-216ENST00000550208 SLC37A4O43826 429 aa25.53■■□□□ 1.68
BRF1-216ENST00000550208 CCNE2O96020 404 aa25.53■■□□□ 1.68
BRF1-216ENST00000550208 TCF7P36402 384 aaPredicted RBP25.53■■□□□ 1.68
BRF1-216ENST00000550208 ACTR2P61160 394 aa25.53■■□□□ 1.68
BRF1-216ENST00000550208 GNL2Q13823 731 aaKnown RBP25.53■■□□□ 1.68
BRF1-216ENST00000550208 ANKRD33Q7Z3H0 272 aa25.53■■□□□ 1.68
BRF1-216ENST00000550208 SLC5A5Q92911 643 aa25.53■■□□□ 1.68
BRF1-216ENST00000550208 TNRC18O15417 2968 aaPredicted RBP25.53■■□□□ 1.68
BRF1-216ENST00000550208 H3BQV1 296 aa25.52■■□□□ 1.68
BRF1-216ENST00000550208 WNT7AO00755 349 aa25.52■■□□□ 1.68
BRF1-216ENST00000550208 ATP2B1P20020 1258 aa25.52■■□□□ 1.68
BRF1-216ENST00000550208 U2AF2P26368 475 aaKnown RBP eCLIP25.52■■□□□ 1.68
BRF1-216ENST00000550208 MFSD10Q14728 455 aa25.52■■□□□ 1.68
BRF1-216ENST00000550208 NAP1L4Q99733 375 aaKnown RBP25.52■■□□□ 1.68
BRF1-216ENST00000550208 NR2E3Q9Y5X4 410 aa25.52■■□□□ 1.68
BRF1-216ENST00000550208 SCN10AQ9Y5Y9 1956 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 HAS3O00219 553 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 F2P00734 622 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 GCFC2P16383 781 aaKnown RBP25.51■■□□□ 1.67
BRF1-216ENST00000550208 KIAA0753Q2KHM9 967 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 MCTP1Q6DN14 999 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 ETNPPLQ8TBG4 499 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 TOX2Q96NM4 488 aa25.51■■□□□ 1.67
BRF1-216ENST00000550208 SEZ6LQ9BYH1 1024 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms