RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 PTGISQ16647 500 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 JAKMIP3Q5VZ66 844 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 XRRA1Q6P2D8 792 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 METTL7BQ6UX53 244 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 TMEM199Q8N511 208 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 RASGRP4Q8TDF6 673 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 CRYGNQ8WXF5 182 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 RNPC3Q96LT9 517 aaKnown RBP13.53□□□□□ -0.24
LETMD1-221ENST00000550100 UIMC1Q96RL1 719 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 IL23AQ9NPF7 189 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 JADE2Q9NQC1 790 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 TPCN1Q9ULQ1 816 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 CCDC196A0A1B0GTZ2 297 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-221ENST00000550100 PPIGQ13427 754 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■■■■□ 22.7
LETMD1-221ENST00000550100 TRIM71Q2Q1W2 868 aaKnown RBP13.52□□□□□ -0.25
LETMD1-221ENST00000550100 GNPTABQ3T906 1256 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 GPRASP2Q96D09 838 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 IL17RAQ96F46 866 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-221ENST00000550100 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 MXRA8Q9BRK3 442 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 OSBPL7Q9BZF2 842 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 MTMR10Q9NXD2 777 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 CHD7Q9P2D1 2997 aa13.52□□□□□ -0.25
LETMD1-221ENST00000550100 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 SUPT20HL2P0C7V6 817 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 PBX2P40425 430 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
LETMD1-221ENST00000550100 NEDD9Q14511 834 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 UTP14CQ5TAP6 766 aaKnown RBP13.51□□□□□ -0.25
LETMD1-221ENST00000550100 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 OTOP2Q7RTS6 562 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 PCYT2Q99447 389 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
LETMD1-221ENST00000550100 KCNH7Q9NS40 1196 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 VPS54Q9P1Q0 977 aa13.51□□□□□ -0.25
LETMD1-221ENST00000550100 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 H3BRB1 525 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 LARGE1O95461 756 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 HOXC8P31273 242 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 SREBF1P36956 1147 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 SCRN1Q12765 414 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 MTMR1Q13613 665 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 NPY5RQ15761 445 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 C7orf31Q8N865 590 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 HERVK_113Q902F9 699 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 GUCD1Q96NT3 240 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 RNF26Q9BY78 433 aaPredicted RBP13.5□□□□□ -0.25
LETMD1-221ENST00000550100 RNPEPQ9H4A4 650 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 TUT1Q9H6E5 874 aaKnown RBP13.5□□□□□ -0.25
LETMD1-221ENST00000550100 PRUNE2Q8WUY3 3088 aa13.5□□□□□ -0.25
LETMD1-221ENST00000550100 A0A0C4DFX4 3053 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 IGLV3-22A0A075B6J6 115 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 MEIS1O00470 390 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 FOSP01100 380 aaPredicted RBP13.49□□□□□ -0.25
LETMD1-221ENST00000550100 FGBP02675 491 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 SMIM10L2AP0DMW4 78 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 SMIM10L2BP0DMW5 78 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 AK2P54819 239 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 SMAD3P84022 425 aaKnown RBP13.49□□□□□ -0.25
LETMD1-221ENST00000550100 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
LETMD1-221ENST00000550100 AGO4Q9HCK5 861 aaKnown RBP13.49□□□□□ -0.25
LETMD1-221ENST00000550100 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
LETMD1-221ENST00000550100 NOP56O00567 594 aaKnown RBP13.48□□□□□ -0.25
LETMD1-221ENST00000550100 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
LETMD1-221ENST00000550100 TREHO43280 583 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 CKBP12277 381 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 TCF7P36402 384 aaPredicted RBP13.48□□□□□ -0.25
LETMD1-221ENST00000550100 ANAPC15P60006 121 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 CEP55Q53EZ4 464 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 SEMA6BQ9H3T3 888 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 PFKFB2O60825 505 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 NBNO60934 754 aa13.48□□□□□ -0.25
LETMD1-221ENST00000550100 CCNE2O96020 404 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms