RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 RNF20Q5VTR2 975 aa15.47■□□□□ 0.07
GCN1-206ENST00000549815 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
GCN1-206ENST00000549815 CUL5Q93034 780 aa15.47■□□□□ 0.07
GCN1-206ENST00000549815 GAS2L1Q99501 681 aaPredicted RBP15.47■□□□□ 0.07
GCN1-206ENST00000549815 GPR20Q99678 358 aa15.47■□□□□ 0.07
GCN1-206ENST00000549815 SENP7Q9BQF6 1050 aa15.47■□□□□ 0.07
GCN1-206ENST00000549815 CNTNAP5Q8WYK1 1306 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 H3BRB1 525 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 CDC45O75419 566 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 ARHGEF15O94989 841 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 FUT2Q10981 343 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 ZNF618Q5T7W0 954 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 APOA5Q6Q788 366 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
GCN1-206ENST00000549815 SERINC5Q86VE9 423 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 HERC6Q8IVU3 1022 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 CCDC82Q8N4S0 544 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 TCEANC2Q96MN5 208 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 TUT1Q9H6E5 874 aaKnown RBP15.46■□□□□ 0.07
GCN1-206ENST00000549815 PSTPIP2Q9H939 334 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 BRPF3Q9ULD4 1205 aa15.46■□□□□ 0.07
GCN1-206ENST00000549815 C17orf102A2RUQ5 167 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 ATP9AO75110 1047 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 CA3P07451 260 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 ITGB5P18084 799 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 WDR5P61964 334 aaKnown RBP15.45■□□□□ 0.06
GCN1-206ENST00000549815 UBE2SQ16763 222 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 KCNB2Q92953 911 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 RNPEPQ9H4A4 650 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 PRDM6Q9NQX0 595 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
GCN1-206ENST00000549815 NOP56O00567 594 aaKnown RBP15.44■□□□□ 0.06
GCN1-206ENST00000549815 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 KCNA2P16389 499 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
GCN1-206ENST00000549815 WWC2Q6AWC2 1192 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 NLRX1Q86UT6 975 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 GPRASP2Q96D09 838 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
GCN1-206ENST00000549815 RBM28Q9NW13 759 aaKnown RBP15.44■□□□□ 0.06
GCN1-206ENST00000549815 UBIAD1Q9Y5Z9 338 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 XIRP2A4UGR9 3374 aa15.44■□□□□ 0.06
GCN1-206ENST00000549815 TREHO43280 583 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 ADAM17P78536 824 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 DEFB103AP81534 67 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 TAP1Q03518 808 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 TRIM50Q86XT4 487 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 PCDHA6Q9UN73 950 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 PCDHA8Q9Y5H6 950 aa15.43■□□□□ 0.06
GCN1-206ENST00000549815 ABHD14A-ACY1A0A1B0GW23 586 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 EPOPA6NHQ4 379 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 ZBTB43O43298 467 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 KCNJ6P48051 423 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 KRT32Q14532 448 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 RTN1Q16799 776 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 HEATR3Q7Z4Q2 680 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 TMCO2Q7Z6W1 182 aaPredicted RBP15.42■□□□□ 0.06
GCN1-206ENST00000549815 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
GCN1-206ENST00000549815 PPM1EQ8WY54 764 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 ATP6V0A1Q93050 837 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 JADE2Q9NQC1 790 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 MICAL3Q7RTP6 2002 aa15.42■□□□□ 0.06
GCN1-206ENST00000549815 GSTTP1A0A1W2PQM5 241 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 SPDYE3A6NKU9 549 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 RSPH10B2B2RC85 870 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 KIF28PB7ZC32 967 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 RFXAPO00287 272 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 LGR5O75473 907 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 RSPH10BP0C881 870 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 POU3F3P20264 500 aaPredicted RBP15.41■□□□□ 0.06
GCN1-206ENST00000549815 IGFBP4P22692 258 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 CDC27P30260 824 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 THPOP40225 353 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 RCAN1P53805 252 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
GCN1-206ENST00000549815 PPP1R18Q6NYC8 613 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 TEX2Q8IWB9 1127 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 OSBPL7Q9BZF2 842 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 CERS4Q9HA82 394 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 RIC8AQ9NPQ8 531 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 SETD4Q9NVD3 440 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 EMSYQ7Z589 1322 aa15.41■□□□□ 0.06
GCN1-206ENST00000549815 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 LCHNA4D1U4 455 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 STXBP3O00186 592 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 MAFGO15525 162 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 TLL1O43897 1013 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 CAND2O75155 1236 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 GJB5O95377 273 aa15.4■□□□□ 0.06
GCN1-206ENST00000549815 HMGB1P09429 215 aaKnown RBP15.4■□□□□ 0.06
GCN1-206ENST00000549815 HSPA4P34932 840 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms