RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 APBB2Q92870 758 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 CDCA3Q99618 268 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 RNF216Q9NWF9 866 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 USP18Q9UMW8 372 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 PTPDC1A2A3K4 754 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 PRKAB2O43741 272 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 PROS1P07225 676 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 BMP3P12645 472 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 MFSD10Q14728 455 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 DUSP6Q16828 381 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 SPECC1Q5M775 1068 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 CES5AQ6NT32 575 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 LLGL2Q6P1M3 1020 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 RPAP2Q8IXW5 612 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 PLCD3Q8N3E9 789 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 LCORLQ8N3X6 602 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 ZNF689Q96CS4 500 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 POMKQ9H5K3 350 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 ARMT1Q9H993 441 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 ATP8A2Q9NTI2 1148 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 CDH22Q9UJ99 828 aa9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 MRPL42Q9Y6G3 142 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-207ENST00000549526 ARIH2O95376 493 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 GH1P01241 217 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 RLBP1P12271 317 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 HOXB8P17481 243 aaPredicted RBP9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 CALML3P27482 149 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 TBC1D8BQ0IIM8 1120 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 OS9Q13438 667 aaPredicted RBP9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 LY6KQ17RY6 165 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 LRSAM1Q6UWE0 723 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 TMEM184AQ6ZMB5 413 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 SERINC5Q86VE9 423 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 C1orf210Q8IVY1 113 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 ZDHHC14Q8IZN3 488 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 TDRD5Q8NAT2 981 aaKnown RBP9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 NECTIN4Q96NY8 510 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 CCPG1Q9ULG6 757 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 ZMIZ1Q9ULJ6 1067 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 MAST4O15021 2626 aa9.83□□□□□ -0.84
SMARCD1-207ENST00000549526 ZNF532Q9HCE3 1301 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 DGKIO75912 1065 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 CTSHP09668 335 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 PDE6AP16499 860 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 MTX1Q13505 466 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 HIC1Q14526 733 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 SLFN13Q68D06 897 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 FAM160B2Q86V87 743 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 PANK1Q8TE04 598 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 STAG1Q8WVM7 1258 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 ATP6V0A1Q93050 837 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 C1orf115Q9H7X2 142 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 RC3H2Q9HBD1 1191 aaKnown RBP9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 MKNK2Q9HBH9 465 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
SMARCD1-207ENST00000549526 PNMA6EA0A0J9YXQ4 647 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 B4DLN1 442 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 HAS3O00219 553 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ENPP3O14638 875 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 DCNP07585 359 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ZNF286BP0CG31 522 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 MS4A1P11836 297 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 MRPL12P52815 198 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ERVFC1P60507 584 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ITIH3Q06033 890 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ARHGAP1Q07960 439 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 TDGQ13569 410 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 TPRNQ4KMQ1 711 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 PAN2Q504Q3 1202 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 SEPT14Q6ZU15 432 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 MKL1Q969V6 931 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 ADAM7Q9H2U9 754 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 TLR7Q9NYK1 1049 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 GREB1LQ9C091 1923 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 CEP295Q9C0D2 2601 aa9.81□□□□□ -0.84
SMARCD1-207ENST00000549526 CACNA1IQ9P0X4 2223 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 TTC3P53804 2025 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 SLC30A4O14863 429 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 F2P00734 622 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 WEE2P0C1S8 567 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 RASA1P20936 1047 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 MTHFRP42898 656 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 KCNC3Q14003 757 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 TTF1Q15361 905 aaPredicted RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 PDE12Q6L8Q7 609 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 RNF207Q6ZRF8 634 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 CMTR2Q8IYT2 770 aaKnown RBP9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 ATRIPQ8WXE1 791 aa9.8□□□□□ -0.84
SMARCD1-207ENST00000549526 BORCS6Q96GS4 357 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms