RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FTOQ9C0B1 505 aaKnown RBP eCLIP13.06□□□□□ -0.32
BEST3-209ENST00000548658 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
BEST3-209ENST00000548658 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
BEST3-209ENST00000548658 ZNF215Q9UL58 517 aaPredicted RBP13.06□□□□□ -0.32
BEST3-209ENST00000548658 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
BEST3-209ENST00000548658 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
BEST3-209ENST00000548658 hCG_1642624A0A1W2PR95 340 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 ZBBXA8MT70 800 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 BAIAP3O94812 1187 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 GNAT1P11488 350 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
BEST3-209ENST00000548658 FUT2Q10981 343 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 Q6ZUG5 572 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
BEST3-209ENST00000548658 GPKOWQ92917 476 aaPredicted RBP eCLIP13.05□□□□□ -0.32
BEST3-209ENST00000548658 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 RIC8AQ9NPQ8 531 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
BEST3-209ENST00000548658 COL6A3P12111 3177 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 SMCO2A6NFE2 343 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 SORBS3O60504 671 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 LGALS2P05162 132 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 CKBP12277 381 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 ATP2A2P16615 1042 aaKnown RBP13.04□□□□□ -0.32
BEST3-209ENST00000548658 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 MTMR1Q13613 665 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 BRF1Q92994 677 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 SLC9A7Q96T83 725 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 GPR20Q99678 358 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
BEST3-209ENST00000548658 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 GRXCR1A8MXD5 290 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 EFCAB14O75071 495 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 FOSL2P15408 326 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 ITGB5P18084 799 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 CDC27P30260 824 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 ADCY7P51828 1080 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
BEST3-209ENST00000548658 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 AP3B2Q13367 1082 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 UBE2SQ16763 222 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 SEPT1Q8WYJ6 367 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
BEST3-209ENST00000548658 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
BEST3-209ENST00000548658 UBIAD1Q9Y5Z9 338 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 EMSYQ7Z589 1322 aa13.03□□□□□ -0.32
BEST3-209ENST00000548658 TRIP12Q14669 1992 aaPredicted RBP13.02□□□□□ -0.32
BEST3-209ENST00000548658 STXBP3O00186 592 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
BEST3-209ENST00000548658 CAND2O75155 1236 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 SMIM10L2AP0DMW4 78 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 SMIM10L2BP0DMW5 78 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 SCG2P13521 617 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 GNA11P29992 359 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 HOXC8P31273 242 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
BEST3-209ENST00000548658 PBX2P40425 430 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.33
BEST3-209ENST00000548658 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 SERINC5Q86VE9 423 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 GAS2L1Q99501 681 aaPredicted RBP13.02□□□□□ -0.33
BEST3-209ENST00000548658 RNPEPQ9H4A4 650 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.33
BEST3-209ENST00000548658 ABHD14A-ACY1A0A1B0GW23 586 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
BEST3-209ENST00000548658 ATP9AO75110 1047 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 CXCL10P02778 98 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 CPA1P15085 419 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 KCNA2P16389 499 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 TCF7P36402 384 aaPredicted RBP13.01□□□□□ -0.33
BEST3-209ENST00000548658 KCNJ6P48051 423 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 EVCP57679 992 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 IKBKEQ14164 716 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 CEP55Q53EZ4 464 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 CNKSR3Q6P9H4 555 aa13.01□□□□□ -0.33
BEST3-209ENST00000548658 MAFAQ8NHW3 353 aaPredicted RBP13.01□□□□□ -0.33
BEST3-209ENST00000548658 DHX38Q92620 1227 aaKnown RBP13.01□□□□□ -0.33
BEST3-209ENST00000548658 MXRA8Q9BRK3 442 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms