RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 RPS6KA1Q15418 735 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 CCDC50Q8IVM0 306 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.4■■□□□ 1.66
NPAS3-206ENST00000548645 COL4A3BPQ9Y5P4 624 aa25.4■■□□□ 1.66
NPAS3-206ENST00000548645 H0YGN5 161 aa25.39■■□□□ 1.66
NPAS3-206ENST00000548645 NOL4O94818 638 aa25.39■■□□□ 1.66
NPAS3-206ENST00000548645 CTNNA1P35221 906 aaKnown RBP25.39■■□□□ 1.66
NPAS3-206ENST00000548645 NFS1Q9Y697 457 aa25.39■■□□□ 1.66
NPAS3-206ENST00000548645 POLR2FP61218 127 aaKnown RBP25.39■■□□□ 1.65
NPAS3-206ENST00000548645 LSM14BQ9BX40 385 aaKnown RBP25.39■■□□□ 1.65
NPAS3-206ENST00000548645 LRRC27Q9C0I9 530 aa25.39■■□□□ 1.65
NPAS3-206ENST00000548645 TXKP42681 527 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 FKBP3Q00688 224 aaKnown RBP25.38■■□□□ 1.65
NPAS3-206ENST00000548645 SNCBQ16143 134 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 ARMC9Q7Z3E5 817 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 PBKQ96KB5 322 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 MCM8Q9UJA3 840 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 SMCO2A6NFE2 343 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 KCNK3O14649 394 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 ECHS1P30084 290 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 ODF2Q5BJF6 829 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 MTMR7Q9Y216 660 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 NIP7Q9Y221 180 aaKnown RBP eCLIP25.38■■□□□ 1.65
NPAS3-206ENST00000548645 CEP83Q9Y592 693 aa25.38■■□□□ 1.65
NPAS3-206ENST00000548645 A0A087X0T9 212 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 PALM3A6NDB9 673 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-206ENST00000548645 FAM228BP0C875 321 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 ZNF844Q08AG5 666 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 MTMR3Q13615 1198 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 WLSQ5T9L3 541 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 AGBL2Q5U5Z8 902 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 USP17L8P0C7I0 530 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 CHRM1P11229 460 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-206ENST00000548645 UAP1Q16222 522 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-206ENST00000548645 SCFD2Q8WU76 684 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 PNMA5Q96PV4 448 aa25.37■■□□□ 1.65
NPAS3-206ENST00000548645 PPP2R2AP63151 447 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 KLHL30Q0D2K2 578 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 RAPGEF1Q13905 1077 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 SLC4A8Q2Y0W8 1093 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 PARP9Q8IXQ6 854 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 MYOCDQ8IZQ8 938 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 OR2W6PQ8NHA6 318 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 TBCKQ8TEA7 893 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 MKNK2Q9HBH9 465 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 ADAMTS1Q9UHI8 967 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 TMCO5BA8MYB1 307 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 NF2P35240 595 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 OSBPL7Q9BZF2 842 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 KIAA1551Q9HCM1 1747 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 BTNL10A8MVZ5 291 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 TRAF5O00463 557 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 LRRC41Q15345 812 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 TMEM266Q2M3C6 531 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 SOGA3Q5TF21 947 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 CYB5D1Q6P9G0 228 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 CACNA2D3Q8IZS8 1091 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 RAD54LQ92698 747 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 SEC16BQ96JE7 1060 aa25.36■■□□□ 1.65
NPAS3-206ENST00000548645 CALR3Q96L12 384 aaKnown RBP25.36■■□□□ 1.65
NPAS3-206ENST00000548645 BSDC1Q9NW68 430 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-206ENST00000548645 BCCIPQ9P287 314 aaKnown RBP eCLIP25.36■■□□□ 1.65
NPAS3-206ENST00000548645 ANKRD20A8PQ5CZ79 823 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 C12orf60Q5U649 245 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 FBXO33Q7Z6M2 555 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 FUKQ8N0W3 1084 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 ACTRT1Q8TDG2 376 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 PACSIN1Q9BY11 444 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 AIPL1Q9NZN9 384 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
NPAS3-206ENST00000548645 KAT6BQ8WYB5 2073 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 C5orf60A6NFR6 353 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 KLRF2D3W0D1 207 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 KIF4AO95239 1232 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 PAEPP09466 180 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 TSPY3P0CV98 308 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 TSPY8P0CW00 308 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 IFI16Q16666 785 aaKnown RBP25.35■■□□□ 1.65
NPAS3-206ENST00000548645 DDX12PQ92771 950 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 P3H4Q92791 437 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 SGSM3Q96HU1 749 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 SPZ1Q9BXG8 430 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 SUFUQ9UMX1 484 aa25.35■■□□□ 1.65
NPAS3-206ENST00000548645 USP17L3A6NCW0 530 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 USP17L4A6NCW7 530 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 CAMTA2O94983 1202 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 ELF1P32519 619 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 FXR2P51116 673 aaKnown RBP eCLIP25.34■■□□□ 1.65
NPAS3-206ENST00000548645 USP11P51784 963 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 ARID5AQ03989 594 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 ASIC2Q16515 512 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 C10orf76Q5T2E6 689 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 USP17L1Q7RTZ2 530 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 RAB34Q9BZG1 259 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 CEP104O60308 925 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 TMOD1P28289 359 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 CALCRLQ16602 461 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 MAGEC3Q8TD91 643 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 ODF2LQ9ULJ1 636 aa25.34■■□□□ 1.65
NPAS3-206ENST00000548645 LEMD3Q9Y2U8 911 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms