RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 F13A1P00488 732 aa5.71□□□□□ -1.5
APP-217ENST00000548570 ARP10275 920 aa5.71□□□□□ -1.5
APP-217ENST00000548570 XRCC5P13010 732 aaKnown RBP5.71□□□□□ -1.5
APP-217ENST00000548570 ELNP15502 786 aa5.71□□□□□ -1.5
APP-217ENST00000548570 CYP3A7P24462 503 aa5.71□□□□□ -1.5
APP-217ENST00000548570 DNAJB2P25686 324 aa5.71□□□□□ -1.5
APP-217ENST00000548570 RGS2P41220 211 aa5.71□□□□□ -1.5
APP-217ENST00000548570 TRAF1Q13077 416 aa5.71□□□□□ -1.5
APP-217ENST00000548570 ITGB3BPQ13352 177 aaPredicted RBP5.71□□□□□ -1.5
APP-217ENST00000548570 PTPAQ15257 358 aa5.71□□□□□ -1.5
APP-217ENST00000548570 MYSM1Q5VVJ2 828 aa5.71□□□□□ -1.5
APP-217ENST00000548570 PCNX4Q63HM2 1172 aa5.71□□□□□ -1.5
APP-217ENST00000548570 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.5
APP-217ENST00000548570 CCDC62Q6P9F0 684 aa5.71□□□□□ -1.5
APP-217ENST00000548570 B3GNT9Q6UX72 402 aa5.71□□□□□ -1.5
APP-217ENST00000548570 ARMCX2Q7L311 632 aa5.71□□□□□ -1.5
APP-217ENST00000548570 KRT25Q7Z3Z0 450 aa5.71□□□□□ -1.5
APP-217ENST00000548570 DNERQ8NFT8 737 aa5.71□□□□□ -1.5
APP-217ENST00000548570 NSUN6Q8TEA1 469 aaKnown RBP5.71□□□□□ -1.5
APP-217ENST00000548570 CCDC12Q8WUD4 166 aaPredicted RBP5.71□□□□□ -1.5
APP-217ENST00000548570 SOCS4Q8WXH5 440 aa5.71□□□□□ -1.5
APP-217ENST00000548570 HAS1Q92839 578 aa5.71□□□□□ -1.5
APP-217ENST00000548570 LENG1Q96BZ8 264 aaPredicted RBP5.71□□□□□ -1.5
APP-217ENST00000548570 ERO1AQ96HE7 468 aa5.71□□□□□ -1.5
APP-217ENST00000548570 INPP4AQ96PE3 977 aaPredicted RBP5.71□□□□□ -1.5
APP-217ENST00000548570 UIMC1Q96RL1 719 aa5.71□□□□□ -1.5
APP-217ENST00000548570 USP28Q96RU2 1077 aa5.71□□□□□ -1.5
APP-217ENST00000548570 APBA2Q99767 749 aa5.71□□□□□ -1.5
APP-217ENST00000548570 NUDT12Q9BQG2 462 aa5.71□□□□□ -1.5
APP-217ENST00000548570 TINF2Q9BSI4 451 aa5.71□□□□□ -1.5
APP-217ENST00000548570 WDR11Q9BZH6 1224 aa5.71□□□□□ -1.5
APP-217ENST00000548570 TMEM60Q9H2L4 133 aa5.71□□□□□ -1.5
APP-217ENST00000548570 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
APP-217ENST00000548570 PTPN22Q9Y2R2 807 aa5.71□□□□□ -1.5
APP-217ENST00000548570 TRIM17Q9Y577 477 aa5.71□□□□□ -1.5
APP-217ENST00000548570 PCDHB6Q9Y5E3 794 aa5.71□□□□□ -1.5
APP-217ENST00000548570 CLIC4Q9Y696 253 aa5.71□□□□□ -1.5
APP-217ENST00000548570 ZSWIM8A7E2V4 1837 aa5.71□□□□□ -1.5
APP-217ENST00000548570 MYH4Q9Y623 1939 aa5.7□□□□□ -1.5
APP-217ENST00000548570 SPATA31C2B4DYI2 1134 aa5.7□□□□□ -1.5
APP-217ENST00000548570 CTAGE5O15320 804 aa5.7□□□□□ -1.5
APP-217ENST00000548570 MSH4O15457 936 aa5.7□□□□□ -1.5
APP-217ENST00000548570 FOSP01100 380 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 CYBAP13498 195 aa5.7□□□□□ -1.5
APP-217ENST00000548570 SMPD1P17405 629 aa5.7□□□□□ -1.5
APP-217ENST00000548570 PDCP20941 246 aa5.7□□□□□ -1.5
APP-217ENST00000548570 CTCFP49711 727 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 USP11P51784 963 aa5.7□□□□□ -1.5
APP-217ENST00000548570 DNM1Q05193 864 aaKnown RBP5.7□□□□□ -1.5
APP-217ENST00000548570 GRIN1Q05586 938 aa5.7□□□□□ -1.5
APP-217ENST00000548570 CACNB2Q08289 660 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 TRIM29Q14134 588 aa5.7□□□□□ -1.5
APP-217ENST00000548570 NONOQ15233 471 aaKnown RBP eCLIP5.7□□□□□ -1.5
APP-217ENST00000548570 FOXD4L6Q3SYB3 417 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 Q4G0T1 1027 aa5.7□□□□□ -1.5
APP-217ENST00000548570 CEP55Q53EZ4 464 aa5.7□□□□□ -1.5
APP-217ENST00000548570 GJC2Q5T442 439 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 ARHGEF16Q5VV41 709 aa5.7□□□□□ -1.5
APP-217ENST00000548570 MCTP1Q6DN14 999 aa5.7□□□□□ -1.5
APP-217ENST00000548570 FOXD4L3Q6VB84 417 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 EEPD1Q7L9B9 569 aa5.7□□□□□ -1.5
APP-217ENST00000548570 NEK8Q86SG6 692 aa5.7□□□□□ -1.5
APP-217ENST00000548570 DPP9Q86TI2 863 aa5.7□□□□□ -1.5
APP-217ENST00000548570 FBXO16Q8IX29 292 aaPredicted RBP5.7□□□□□ -1.5
APP-217ENST00000548570 ETNPPLQ8TBG4 499 aa5.7□□□□□ -1.5
APP-217ENST00000548570 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
APP-217ENST00000548570 COPS5Q92905 334 aa5.7□□□□□ -1.5
APP-217ENST00000548570 MTMR9Q96QG7 549 aa5.7□□□□□ -1.5
APP-217ENST00000548570 IWS1Q96ST2 819 aa5.7□□□□□ -1.5
APP-217ENST00000548570 MXRA8Q9BRK3 442 aa5.7□□□□□ -1.5
APP-217ENST00000548570 BEGAINQ9BUH8 593 aa5.7□□□□□ -1.5
APP-217ENST00000548570 GLT8D2Q9H1C3 349 aa5.7□□□□□ -1.5
APP-217ENST00000548570 KCNMB3Q9NPA1 279 aa5.7□□□□□ -1.5
APP-217ENST00000548570 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
APP-217ENST00000548570 DDX41Q9UJV9 622 aaKnown RBP5.7□□□□□ -1.5
APP-217ENST00000548570 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
APP-217ENST00000548570 SYNGAP1Q96PV0 1343 aa5.7□□□□□ -1.5
APP-217ENST00000548570 LOC102724159A0A0B4J2E5 919 aa5.69□□□□□ -1.5
APP-217ENST00000548570 CCDC194A0A1B0GVG4 234 aa5.69□□□□□ -1.5
APP-217ENST00000548570 SPDYE3A6NKU9 549 aa5.69□□□□□ -1.5
APP-217ENST00000548570 H3BQV1 296 aa5.69□□□□□ -1.5
APP-217ENST00000548570 RBAK-RBAKDNI3L0D1 243 aa5.69□□□□□ -1.5
APP-217ENST00000548570 TNFRSF10AO00220 468 aa5.69□□□□□ -1.5
APP-217ENST00000548570 ADCY3O60266 1144 aa5.69□□□□□ -1.5
APP-217ENST00000548570 EIF3JO75822 258 aaKnown RBP5.69□□□□□ -1.5
APP-217ENST00000548570 S1PR4O95977 384 aa5.69□□□□□ -1.5
APP-217ENST00000548570 CCNE2O96020 404 aa5.69□□□□□ -1.5
APP-217ENST00000548570 GNRH1P01148 92 aa5.69□□□□□ -1.5
APP-217ENST00000548570 INHAP05111 366 aa5.69□□□□□ -1.5
APP-217ENST00000548570 HSP90AA1P07900 732 aaKnown RBP5.69□□□□□ -1.5
APP-217ENST00000548570 MYCLP12524 364 aaPredicted RBP5.69□□□□□ -1.5
APP-217ENST00000548570 KCNA2P16389 499 aa5.69□□□□□ -1.5
APP-217ENST00000548570 XBP1P17861 261 aa5.69□□□□□ -1.5
APP-217ENST00000548570 ATP2B1P20020 1258 aa5.69□□□□□ -1.5
APP-217ENST00000548570 CCND3P30281 292 aaPredicted RBP5.69□□□□□ -1.5
APP-217ENST00000548570 ICAM3P32942 547 aa5.69□□□□□ -1.5
APP-217ENST00000548570 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
APP-217ENST00000548570 TRAPPC10P48553 1259 aa5.69□□□□□ -1.5
APP-217ENST00000548570 SPIRE1Q08AE8 756 aa5.69□□□□□ -1.5
APP-217ENST00000548570 ACVR2BQ13705 512 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms