RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SMARCC1Q92922 1105 aaPredicted RBP3.77□□□□□ -1.81
CEP290-204ENST00000547926 BTG4Q9NY30 223 aa3.77□□□□□ -1.81
CEP290-204ENST00000547926 SLC7A5Q01650 507 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 ARID5AQ03989 594 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 KIAA1211LQ6NV74 962 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 FGD4Q96M96 766 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 KLHL25Q9H0H3 589 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 ZNF408Q9H9D4 720 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.76□□□□□ -1.81
CEP290-204ENST00000547926 SLC12A7Q9Y666 1083 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 FPR2P25090 351 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 VHLLQ6RSH7 139 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 ZC3H18Q86VM9 953 aaKnown RBP3.76□□□□□ -1.81
CEP290-204ENST00000547926 TAX1BP1Q86VP1 789 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 FAM126BQ8IXS8 530 aa3.76□□□□□ -1.81
CEP290-204ENST00000547926 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
CEP290-204ENST00000547926 HEATR6Q6AI08 1181 aaKnown RBP3.75□□□□□ -1.81
CEP290-204ENST00000547926 ARRDC4Q8NCT1 418 aa3.75□□□□□ -1.81
CEP290-204ENST00000547926 MICAL1Q8TDZ2 1067 aa3.75□□□□□ -1.81
CEP290-204ENST00000547926 APEX2Q9UBZ4 518 aa3.75□□□□□ -1.81
CEP290-204ENST00000547926 B2RBV5 119 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 ITGA4P13612 1032 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 ACO1P21399 889 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 TCEAL1Q15170 157 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 CCDC142Q17RM4 750 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 LARP1BQ659C4 914 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 C6orf15Q6UXA7 325 aaPredicted RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 KLHL36Q8N4N3 616 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 LMF1Q96S06 567 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 GMLQ99445 158 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 LGR4Q9BXB1 951 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 WHRNQ9P202 907 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 ADAM29Q9UKF5 820 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 C2orf71A6NGG8 1288 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 KLHL18O94889 574 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 COMTP21964 271 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 BMP5P22003 454 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 GJA4P35212 333 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 INF2Q27J81 1249 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 TRMT10BQ6PF06 316 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 ADAT2Q7Z6V5 191 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 MRGPRGQ86SM5 289 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 DCP2Q8IU60 420 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 ZNF513Q8N8E2 541 aaPredicted RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 SLC43A3Q8NBI5 491 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 GIMAP8Q8ND71 665 aaPredicted RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 EDAQ92838 391 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 GPRC5CQ9NQ84 441 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 ACTR10Q9NZ32 417 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 PRKAG3Q9UGI9 489 aa3.74□□□□□ -1.81
CEP290-204ENST00000547926 SF3B6Q9Y3B4 125 aaKnown RBP3.74□□□□□ -1.81
CEP290-204ENST00000547926 NPHP3-ACAD11A0A0J9YXS1 232 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 THBDP07204 575 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 ZC3H6P61129 1189 aaKnown RBP3.73□□□□□ -1.81
CEP290-204ENST00000547926 NAALADL2Q58DX5 795 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 TMC5Q6UXY8 1006 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 GPR150Q8NGU9 434 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 SLC2A4RGQ9NR83 387 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 CLEC1BQ9P126 229 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 FTSJ1Q9UET6 329 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 CGGBP1Q9UFW8 167 aaPredicted RBP3.73□□□□□ -1.81
CEP290-204ENST00000547926 C22orf46C9J442 243 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 SEPHS1P49903 392 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 MRM1Q6IN84 353 aaKnown RBP3.73□□□□□ -1.81
CEP290-204ENST00000547926 CELF2-AS1Q8N7Q2 184 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 HNRNPLLQ8WVV9 542 aaKnown RBP3.73□□□□□ -1.81
CEP290-204ENST00000547926 GBP3Q9H0R5 595 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 PCDH18Q9HCL0 1135 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 TMEFF2Q9UIK5 374 aaPredicted RBP3.73□□□□□ -1.81
CEP290-204ENST00000547926 SUGT1Q9Y2Z0 365 aa3.73□□□□□ -1.81
CEP290-204ENST00000547926 A0A087WZG4 1122 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 ANKRD34BA5PLL1 514 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 PPM1BO75688 479 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 LRG1P02750 347 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 NKX3-2P78367 333 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 NOLC1Q14978 699 aaKnown RBP eCLIP3.72□□□□□ -1.81
CEP290-204ENST00000547926 HS1BP3Q53T59 392 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 TNNI3KQ59H18 835 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 FAM178BQ8IXR5 827 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 ARHGEF39Q8N4T4 335 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 CLIP3Q96DZ5 547 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 TTPALQ9BTX7 342 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 DIS3Q9Y2L1 958 aaKnown RBP3.72□□□□□ -1.81
CEP290-204ENST00000547926 BACE2Q9Y5Z0 518 aa3.72□□□□□ -1.81
CEP290-204ENST00000547926 DDAH1O94760 285 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 TUBA3CQ13748 450 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 TUBA3EQ6PEY2 450 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 TEPPQ6URK8 271 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 ANKS3Q6ZW76 656 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 AP5M1Q9H0R1 490 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 BARX1Q9HBU1 254 aaPredicted RBP3.71□□□□□ -1.81
CEP290-204ENST00000547926 ST7Q9NRC1 585 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 HECAQ9UBI9 543 aaPredicted RBP3.71□□□□□ -1.81
CEP290-204ENST00000547926 FBXL7Q9UJT9 491 aa3.71□□□□□ -1.81
CEP290-204ENST00000547926 TBX1O43435 398 aa3.71□□□□□ -1.82
CEP290-204ENST00000547926 GJB6O95452 261 aa3.71□□□□□ -1.82
CEP290-204ENST00000547926 ZNF888P0CJ79 500 aaPredicted RBP3.71□□□□□ -1.82
CEP290-204ENST00000547926 PAMP19021 973 aa3.71□□□□□ -1.82
CEP290-204ENST00000547926 NCAPHQ15003 741 aa3.71□□□□□ -1.82
CEP290-204ENST00000547926 PPP1R14AQ96A00 147 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms