RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 EGFLAMQ63HQ2 1017 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 POMZP3Q6PJE2 187 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 ANKS3Q6ZW76 656 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 USP51Q70EK9 711 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 FAM126BQ8IXS8 530 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 CDK5RAP1Q96SZ6 601 aaKnown RBP5.97□□□□□ -1.45
SCAF11-210ENST00000547654 EPN3Q9H201 632 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 NGRNQ9NPE2 291 aaKnown RBP5.97□□□□□ -1.45
SCAF11-210ENST00000547654 X6R8D5 127 aa5.97□□□□□ -1.45
SCAF11-210ENST00000547654 OVOL3O00110 214 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 SLC6A11P48066 632 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 PRSS53Q2L4Q9 553 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 NOL8Q76FK4 1167 aaKnown RBP5.96□□□□□ -1.46
SCAF11-210ENST00000547654 MILR1Q7Z6M3 343 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 TMEM145Q8NBT3 493 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 SSBP3Q9BWW4 388 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-210ENST00000547654 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
SCAF11-210ENST00000547654 NPEPPSL1A6NEC2 478 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 DLX3O60479 287 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 B4GALT3O60512 393 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 NAT2P11245 290 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 LCP1P13796 627 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 IGBP1P78318 339 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 NKX3-2P78367 333 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 PRR31Q5SQ13 230 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 RNF187Q5TA31 235 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-210ENST00000547654 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-210ENST00000547654 CIR1Q86X95 450 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-210ENST00000547654 RCBTB1Q8NDN9 531 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 ZCRB1Q8TBF4 217 aaKnown RBP5.95□□□□□ -1.46
SCAF11-210ENST00000547654 PPP1R14AQ96A00 147 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 MRIQ9BWK5 157 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 ARHGEF4Q9NR80 690 aa5.95□□□□□ -1.46
SCAF11-210ENST00000547654 ARID4BQ4LE39 1312 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-210ENST00000547654 NOP56O00567 594 aaKnown RBP5.94□□□□□ -1.46
SCAF11-210ENST00000547654 CYR61O00622 381 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 DDAH1O94760 285 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 ZNF28P17035 718 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 FPR2P25090 351 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 ANAPC15P60006 121 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 RPL11P62913 178 aaKnown RBP5.94□□□□□ -1.46
SCAF11-210ENST00000547654 PPP2R2AP63151 447 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 SERINC3Q13530 473 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 NTRK3Q16288 839 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 PTPROQ16827 1216 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 MROH9Q5TGP6 573 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 NBPF6Q5VWK0 638 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 CRIP3Q6Q6R5 217 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 JAZF1Q86VZ6 243 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 RIOX2Q8IUF8 465 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 ZFPM1Q8IX07 1006 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 OSBP2Q969R2 916 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 NBPF4Q96M43 638 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 ZSWIM3Q96MP5 696 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 CLIC6Q96NY7 704 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 TMEM168Q9H0V1 697 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 VPS11Q9H270 941 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 PPP4R1LQ9P1A2 415 aa5.94□□□□□ -1.46
SCAF11-210ENST00000547654 MYO1BO43795 1136 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 ADCY3O60266 1144 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 MARCH6O60337 910 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 FZD7O75084 574 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 HSD3B2P26439 372 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 ICAM4Q14773 271 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 EEPD1Q7L9B9 569 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 PALM2Q8IXS6 379 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 SGSM3Q96HU1 749 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 DEF6Q9H4E7 631 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 ST7Q9NRC1 585 aa5.93□□□□□ -1.46
SCAF11-210ENST00000547654 COA3Q9Y2R0 106 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-210ENST00000547654 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 CYP7B1O75881 506 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 SLPIP03973 132 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 MAP4K2Q12851 820 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 ADAM9Q13443 819 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 CDSNQ15517 529 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 SV2CQ496J9 727 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 IQCEQ6IPM2 695 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 ZNF585AQ6P3V2 769 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 ARHGEF18Q6ZSZ5 1173 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 Q8N1X5 172 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 ZNF669Q96BR6 464 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-210ENST00000547654 TRMT2BQ96GJ1 504 aaKnown RBP5.92□□□□□ -1.46
SCAF11-210ENST00000547654 TCAF1Q9Y4C2 921 aa5.92□□□□□ -1.46
SCAF11-210ENST00000547654 TIMM13Q9Y5L4 95 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-210ENST00000547654 MRPL42Q9Y6G3 142 aaKnown RBP5.92□□□□□ -1.46
SCAF11-210ENST00000547654 U2SURPO15042 1029 aaKnown RBP5.91□□□□□ -1.46
SCAF11-210ENST00000547654 MSCO60682 206 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 CPP00450 1065 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 SELENOPP49908 381 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 CHRNA2Q15822 529 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 CR1LQ2VPA4 569 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 ST13P5Q8NFI4 369 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-210ENST00000547654 IGDCC4Q8TDY8 1250 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 GPATCH3Q96I76 525 aa5.91□□□□□ -1.46
SCAF11-210ENST00000547654 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
SCAF11-210ENST00000547654 WRNIP1Q96S55 665 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms