RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 UPP2O95045 317 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 SMIM10L2AP0DMW4 78 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 SMIM10L2BP0DMW5 78 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 UBA1P22314 1058 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 HOXA13P31271 388 aaPredicted RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 HTRA4P83105 476 aaPredicted RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 GHRHRQ02643 423 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 GPNMBQ14956 572 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 HSDL1Q3SXM5 330 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 EPC2Q52LR7 807 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 RALYLQ86SE5 291 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 FIBCD1Q8N539 461 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 C17orf80Q9BSJ5 609 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 NSUN3Q9H649 340 aaKnown RBP10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 PRKAG3Q9UGI9 489 aa10.55□□□□□ -0.72
AC055716.3-201ENST00000547533 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 FAM86C2PA6NEL3 165 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 GRXCR2A6NFK2 248 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 H3BNC9 293 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 FIBPO43427 364 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 LGALS2P05162 132 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 CTSHP09668 335 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 ZNF200P98182 395 aaPredicted RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 METTL7BQ6UX53 244 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 NLRX1Q86UT6 975 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 TMEM192Q8IY95 271 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 PIAS4Q8N2W9 510 aaPredicted RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 RUFY2Q8WXA3 655 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 IL17RAQ96F46 866 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 C11orf84Q9BUA3 381 aaPredicted RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 LMAN2LQ9H0V9 348 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 KCNH6Q9H252 994 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 OSBPL3Q9H4L5 887 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 DOCK5Q9H7D0 1870 aa10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
AC055716.3-201ENST00000547533 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 DCXO43602 365 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 RB1P06400 928 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 CTNNB1P35222 781 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 ARHGAP4P98171 946 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 TAF2Q6P1X5 1199 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 XRRA1Q6P2D8 792 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 TRAF7Q6Q0C0 670 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 SPRED2Q7Z698 418 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 CATIPQ7Z7H3 387 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 CLDND1Q9NY35 253 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 SEC63Q9UGP8 760 aaKnown RBP10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 NRCAMQ92823 1304 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 MUC6Q6W4X9 2439 aa10.53□□□□□ -0.72
AC055716.3-201ENST00000547533 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 M0QZ92 97 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 IFIT3O14879 490 aaKnown RBP10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 TREHO43280 583 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 IL9P15248 144 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 MBTPS1Q14703 1052 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 GRM4Q14833 912 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 WTAPQ15007 396 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 TCEAL5Q5H9L2 206 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 CTCFLQ8NI51 663 aaPredicted RBP10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 NEK9Q8TD19 979 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 WNT8BQ93098 351 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 MTMR8Q96EF0 704 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 PIGSQ96S52 555 aa10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 RNF216Q9NWF9 866 aaPredicted RBP10.52□□□□□ -0.73
AC055716.3-201ENST00000547533 PIEZO1Q92508 2521 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 H3BQ06 376 aaPredicted RBP10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 RGS20O76081 388 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 ICAM3P32942 547 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 KIF5BP33176 963 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 SP2Q02086 613 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 NUCB1Q02818 461 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 TCTN1Q2MV58 587 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 UTP14CQ5TAP6 766 aaKnown RBP10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 ADHFE1Q8IWW8 467 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 NCOA7Q8NI08 942 aa10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 RRP36Q96EU6 259 aaKnown RBP10.51□□□□□ -0.73
AC055716.3-201ENST00000547533 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms