RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 TNNC1P63316 161 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 GIGYF2Q6Y7W6 1299 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 CEP128Q6ZU80 1094 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 NKX2-3Q8TAU0 364 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 YIPF2Q9BWQ6 316 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 EXOC1Q9NV70 894 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 LNPEPQ9UIQ6 1025 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 ZSCAN9O15535 394 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 MST1RQ04912 1400 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 UAP1Q16222 522 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 NTRK3Q16288 839 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 OTUD6AQ7L8S5 288 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 CD302Q8IX05 232 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 ANKRD42Q8N9B4 389 aa13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.04□□□□□ -0.32
RBFOX1-208ENST00000547372 MRC1P22897 1456 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 TNFRSF8P28908 595 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 CCNJLQ8IV13 435 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 SNRNP27Q8WVK2 155 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 SLC12A4Q9UP95 1085 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 ZNF189O75820 626 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 ETS2P15036 469 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 ASIC1P78348 528 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 TSNAXIP1Q2TAA8 658 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 NUDCD1Q96RS6 583 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 SCOCQ9UIL1 159 aa13.03□□□□□ -0.32
RBFOX1-208ENST00000547372 RARAP10276 462 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 SLC1A4P43007 532 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 DNM2P50570 870 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 GALNT17Q6IS24 598 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 TEX9Q8N6V9 391 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 FAM89AQ96GI7 184 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 H7C1D1 291 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 RAD21O60216 631 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 COPS2P61201 443 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 RCN2Q14257 317 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 MEA1Q16626 185 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 DNAAF5Q86Y56 855 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 NDNQ99608 321 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 NEUROG2Q9H2A3 272 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 METTL5Q9NRN9 209 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 ANAPC4Q9UJX5 808 aa13.02□□□□□ -0.32
RBFOX1-208ENST00000547372 ZCCHC18P0CG32 403 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 KRT2P35908 639 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 HSPA9P38646 679 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 ERMARDQ5T6L9 678 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 VSIG1Q86XK7 387 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 GDAP1Q8TB36 358 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 NSRP1Q9H0G5 558 aaKnown RBP13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
RBFOX1-208ENST00000547372 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 MBD4O95243 580 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 DEXIO95424 95 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 PRLRP16471 622 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 IFI35P80217 286 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 PTGDRQ13258 359 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 MTA1Q13330 715 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 LPIN2Q92539 896 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 ARHGAP20Q9P2F6 1191 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 A0A1W2PQC6 194 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 C5orf60A6NFR6 353 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 IMPDH2P12268 514 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 IRF2BP1Q8IU81 584 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 TBC1D10CQ8IV04 446 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
RBFOX1-208ENST00000547372 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms