RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 CAPN6Q9Y6Q1 641 aa16.13■□□□□ 0.17
LETMD1-209ENST00000547318 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
LETMD1-209ENST00000547318 RNF40O75150 1001 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 FOSP01100 380 aaPredicted RBP16.12■□□□□ 0.17
LETMD1-209ENST00000547318 APBA1Q02410 837 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 HGSNATQ68CP4 663 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 SYNPO2Q9UMS6 1093 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 PDE2AO00408 941 aaPredicted RBP16.12■□□□□ 0.17
LETMD1-209ENST00000547318 EPHB6O15197 1021 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 ONECUT3O60422 494 aaPredicted RBP16.12■□□□□ 0.17
LETMD1-209ENST00000547318 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
LETMD1-209ENST00000547318 PLA2G4BP0C869 781 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 KCNMA1Q12791 1236 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 TRAF1Q13077 416 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 PICALMQ13492 652 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
LETMD1-209ENST00000547318 ALS2CLQ60I27 953 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 GBP6Q6ZN66 633 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 KCNK18Q7Z418 384 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 CAVIN3Q969G5 261 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 TEKT1Q969V4 418 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 PCDHA2Q9Y5H9 948 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 DUSP10Q9Y6W6 482 aa16.12■□□□□ 0.17
LETMD1-209ENST00000547318 GOLGA8KD6RF30 607 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 CETN3O15182 167 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 OPA1O60313 960 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 PPP1R11O60927 126 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 MOCS3O95396 460 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 SYF2O95926 243 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 PLEKP08567 350 aaPredicted RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 HDLBPQ00341 1268 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 SLC20A2Q08357 652 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 FRMD5Q7Z6J6 570 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 EIF1ADQ8N9N8 165 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 ZC3H12CQ9C0D7 883 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 KCTD10Q9H3F6 313 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 PLCB1Q9NQ66 1216 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 NAB2Q15742 525 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 UBE2SQ16763 222 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 Q4G0T1 1027 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 TDRD12Q587J7 1177 aaKnown RBP16.11■□□□□ 0.17
LETMD1-209ENST00000547318 EEF2KMTQ96G04 330 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 FAM20AQ96MK3 541 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 EMILIN3Q9NT22 766 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 STIM2Q9P246 746 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 FBXL5Q9UKA1 691 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 DAAM1Q9Y4D1 1078 aa16.11■□□□□ 0.17
LETMD1-209ENST00000547318 GOLGA6BA6NDN3 693 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
LETMD1-209ENST00000547318 ZNF185O15231 689 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
LETMD1-209ENST00000547318 CYP11B2P19099 503 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 EPS15P42566 896 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 GPBP1Q86WP2 473 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 ANO3Q9BYT9 981 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 METTL14Q9HCE5 456 aaKnown RBP16.1■□□□□ 0.17
LETMD1-209ENST00000547318 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
LETMD1-209ENST00000547318 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 PPFIA1Q13136 1202 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 FMNL3Q8IVF7 1028 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 TMX4Q9H1E5 349 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 KIAA1024Q9UPX6 916 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 NOL4O94818 638 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 RPA1P27694 616 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 ECM1Q16610 540 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 HERC4Q5GLZ8 1057 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 IFT20Q8IY31 132 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 GJD4Q96KN9 370 aaPredicted RBP16.09■□□□□ 0.17
LETMD1-209ENST00000547318 ZDHHC15Q96MV8 337 aa16.09■□□□□ 0.17
LETMD1-209ENST00000547318 PDXKO00764 312 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
LETMD1-209ENST00000547318 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
LETMD1-209ENST00000547318 NPR1P16066 1061 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 MMP14P50281 582 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 GYS2P54840 703 aa16.08■□□□□ 0.16
LETMD1-209ENST00000547318 SLC12A3P55017 1021 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms