RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
NPAS3-205ENST00000547068 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 CCT8L1PA6NM43 557 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 KLRC4O43908 158 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 UAP1Q16222 522 aaPredicted RBP11.76□□□□□ -0.53
NPAS3-205ENST00000547068 CDCA2Q69YH5 1023 aaPredicted RBP11.76□□□□□ -0.53
NPAS3-205ENST00000547068 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 CCHCR1Q8TD31 782 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 P2RX5Q93086 422 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 MTA3Q9BTC8 594 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
NPAS3-205ENST00000547068 LRRC53A6NM62 1247 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 EPHB6O15197 1021 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 PALMO75781 387 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 FTCDO95954 541 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 DRD4P21917 467 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 CCNE1P24864 410 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 SLC1A4P43007 532 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 MAGOHP61326 146 aaKnown RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 ADCY2Q08462 1091 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 AGBL2Q5U5Z8 902 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 CAPRIN2Q6IMN6 1127 aaKnown RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 RRAGAQ7L523 313 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 CCDC197Q8NCU1 140 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 UBLCP1Q8WVY7 318 aaPredicted RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 MAGOHBQ96A72 148 aaKnown RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 CHMP6Q96FZ7 201 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 SLC39A2Q9NP94 309 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 L3MBTL1Q9Y468 752 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 PNPLA7Q6ZV29 1317 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 GSG1L2A8MUP6 293 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 GYS1P13807 737 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 RIPK1Q13546 671 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 CUL1Q13616 776 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 SLMAPQ14BN4 828 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 NPY5RQ15761 445 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
NPAS3-205ENST00000547068 EIF1ADQ8N9N8 165 aaKnown RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
NPAS3-205ENST00000547068 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 PRKAB2O43741 272 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 PLEKHA8P1O95397 391 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 ECHS1P30084 290 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 TRAPPC10P48553 1259 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 NAALADL2Q58DX5 795 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 SUSD4Q5VX71 490 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 PLIN2Q99541 437 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 PACSIN2Q9UNF0 486 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 TNKSO95271 1327 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 MYL1P05976 194 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 GSTA1P08263 222 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 EHHADHQ08426 723 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 FUT2Q10981 343 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 TPTE2Q6XPS3 522 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 TBC1D1Q86TI0 1168 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 INPP4AQ96PE3 977 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 RNF41Q9H4P4 317 aaPredicted RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
NPAS3-205ENST00000547068 SLC12A4Q9UP95 1085 aa11.74□□□□□ -0.53
NPAS3-205ENST00000547068 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 ENO4A6NNW6 628 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 MYBP10242 640 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 TDRD12Q587J7 1177 aaKnown RBP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 LDHAL6AQ6ZMR3 332 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 DDX42Q86XP3 938 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 HOMER3Q9NSC5 361 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 FBXL5Q9UKA1 691 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 SIK3Q9Y2K2 1263 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 ANKRD33BA6NCL7 494 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
NPAS3-205ENST00000547068 CDC25CP30307 473 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 NLRP5P59047 1200 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 PDE4DQ08499 809 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
NPAS3-205ENST00000547068 ASTE1Q2TB18 679 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms