RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NOD1Q9Y239 953 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 SEC24BO95487 1268 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 LGALS2P05162 132 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 CSF2RAP15509 400 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 CYP2C18P33260 490 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 EPHB4P54760 987 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 CHMP4BP1P59074 171 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 STK3Q13188 491 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 PSRC1Q6PGN9 363 aaPredicted RBP18.15■□□□□ 0.5
DDX54-204ENST00000546898 C7orf31Q8N865 590 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 GPR20Q99678 358 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 LARP6Q9BRS8 491 aaKnown RBP18.15■□□□□ 0.5
DDX54-204ENST00000546898 C16orf70Q9BSU1 422 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
DDX54-204ENST00000546898 TMEM260Q9NX78 707 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
DDX54-204ENST00000546898 PFKFB2O60825 505 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 CYP2C9P11712 490 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 AK2P54819 239 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 ARHGAP4P98171 946 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 SCRN1Q12765 414 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 PTGISQ16647 500 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 CEP55Q53EZ4 464 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 JAKMIP3Q5VZ66 844 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 NIPA1Q7RTP0 329 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 CCDC155Q8N6L0 562 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 LRCH3Q96II8 777 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 RNPC3Q96LT9 517 aaKnown RBP18.14■□□□□ 0.49
DDX54-204ENST00000546898 WNT8AQ9H1J5 351 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 BCAS3Q9H6U6 928 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 IL23AQ9NPF7 189 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
DDX54-204ENST00000546898 H3BRB1 525 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 ATP9AO75110 1047 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 CYP3A4P08684 503 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 BFSP2Q13515 415 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 GDF6Q6KF10 455 aaPredicted RBP18.13■□□□□ 0.49
DDX54-204ENST00000546898 CAGE1Q8TC20 777 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 PPP1R13LQ8WUF5 828 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.13■□□□□ 0.492e-8■■□□□ 11.7
DDX54-204ENST00000546898 TUT1Q9H6E5 874 aaKnown RBP18.13■□□□□ 0.49
DDX54-204ENST00000546898 KCNH7Q9NS40 1196 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 HDAC6Q9UBN7 1215 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 ZNF215Q9UL58 517 aaPredicted RBP18.13■□□□□ 0.49
DDX54-204ENST00000546898 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 NFASCO94856 1347 aa18.13■□□□□ 0.49
DDX54-204ENST00000546898 SZT2Q5T011 3432 aa18.12■□□□□ 0.49
DDX54-204ENST00000546898 RFC2P35250 354 aa18.12■□□□□ 0.49
DDX54-204ENST00000546898 ZNF76P36508 570 aa18.12■□□□□ 0.49
DDX54-204ENST00000546898 CCL23P55773 120 aa18.12■□□□□ 0.49
DDX54-204ENST00000546898 MEIS1O00470 390 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 PFKMP08237 780 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
DDX54-204ENST00000546898 NEK4P51957 841 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 NLRP5P59047 1200 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 SP4Q02446 784 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 RBL2Q08999 1139 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 TMEM240Q5SV17 173 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 C16orf59Q7L2K0 433 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 RPUSD2Q8IZ73 545 aaKnown RBP18.11■□□□□ 0.49
DDX54-204ENST00000546898 RETREG2Q8NC44 543 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 AFAP1L1Q8TED9 768 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 SEPT1Q8WYJ6 367 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 SDF4Q9BRK5 362 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 C22orf23Q9BZE7 217 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 JPH1Q9HDC5 661 aaPredicted RBP18.11■□□□□ 0.49
DDX54-204ENST00000546898 PKD2L1Q9P0L9 805 aa18.11■□□□□ 0.49
DDX54-204ENST00000546898 EMSYQ7Z589 1322 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 HOXC8P31273 242 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 SMAD3P84022 425 aaKnown RBP18.1■□□□□ 0.49
DDX54-204ENST00000546898 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
DDX54-204ENST00000546898 PTK7Q13308 1070 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 GALNT17Q6IS24 598 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 DAGLBQ8NCG7 672 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 CYP2W1Q8TAV3 490 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 SCLYQ96I15 445 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 MTIF3Q9H2K0 278 aaKnown RBP18.1■□□□□ 0.49
DDX54-204ENST00000546898 AGO4Q9HCK5 861 aaKnown RBP18.1■□□□□ 0.49
DDX54-204ENST00000546898 SLC9A2Q9UBY0 812 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 PCDHA4Q9UN74 947 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 WDR81Q562E7 1941 aa18.1■□□□□ 0.49
DDX54-204ENST00000546898 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 C17orf102A2RUQ5 167 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 FAM86B1E9PN63 330 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 ADAMTS3O15072 1205 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 FAM86B2P0C5J1 330 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 ARP10275 920 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 ACRP10323 421 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 XBP1P17861 261 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
DDX54-204ENST00000546898 RASIP1Q5U651 963 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 ZNF365Q70YC5 407 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms