RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 KCNJ6P48051 423 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 YARSP54577 528 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 POLR2FP61218 127 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 LMNB2Q03252 620 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 LRMPQ12912 555 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 LRRC47Q8N1G4 583 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SSH1-203ENST00000546433 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 RAB3IPQ96QF0 476 aaPredicted RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 SRGAP2BP0DMP2 458 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 ADD2P35612 726 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 SEPT2Q15019 361 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.35□□□□□ -0.59
SSH1-203ENST00000546433 SERPINB13Q9UIV8 391 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 NRKQ7Z2Y5 1582 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 FKBP1BP68106 108 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 NAA25Q14CX7 972 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 RDH13Q8NBN7 331 aa11.35□□□□□ -0.59
SSH1-203ENST00000546433 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
SSH1-203ENST00000546433 ZNF853P0CG23 659 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 FCER1AP12319 257 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 MFAP3P55082 362 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
SSH1-203ENST00000546433 CNOT6LQ96LI5 555 aaKnown RBP11.34□□□□□ -0.59
SSH1-203ENST00000546433 ZNF521Q96K83 1311 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 PPLO60437 1756 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 CASQ2O14958 399 aaPredicted RBP11.34□□□□□ -0.59
SSH1-203ENST00000546433 ABCB4P21439 1286 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
SSH1-203ENST00000546433 GABPAQ06546 454 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 SEPT6Q14141 434 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 TFDP1Q14186 410 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 EXOC3L4Q17RC7 722 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 TRIM50Q86XT4 487 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 TTLL11Q8NHH1 800 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 PPP4R1Q8TF05 950 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 PCDHA1Q9Y5I3 950 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 PASKQ96RG2 1323 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 THAP12O43422 761 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 TTLL1O95922 423 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 ADCY8P40145 1251 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 HESX1Q9UBX0 185 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 FKTNO75072 461 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 SH2D4BQ5SQS7 431 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 RABGGTAQ92696 567 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 KLHL14Q9P2G3 628 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 DESI2Q9BSY9 194 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 NUF2Q9BZD4 464 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
SSH1-203ENST00000546433 PNPLA7Q6ZV29 1317 aa11.34□□□□□ -0.59
SSH1-203ENST00000546433 ASB14A6NK59 587 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 CYP21A2P08686 494 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ERCC3P19447 782 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 MYL7Q01449 175 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ZNF658Q5TYW1 1059 aaPredicted RBP11.33□□□□□ -0.6
SSH1-203ENST00000546433 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
SSH1-203ENST00000546433 IFT122Q9HBG6 1241 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 TMEM232C9JQI7 657 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 M0R2C6 588 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 TMEM191BP0C7N4 346 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ATP6V0A1Q93050 837 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ATF2P15336 505 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 RGS2P41220 211 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
SSH1-203ENST00000546433 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
SSH1-203ENST00000546433 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 GSDMBQ8TAX9 411 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 P2RX5Q93086 422 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 CDC23Q9UJX2 597 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 FEM1BQ9UK73 627 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 H7C1W4 665 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 MMP1P03956 469 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
SSH1-203ENST00000546433 ADORA1P30542 326 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
SSH1-203ENST00000546433 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 CCDC13Q8IYE1 715 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
SSH1-203ENST00000546433 PFDN6O15212 129 aa11.32□□□□□ -0.6
SSH1-203ENST00000546433 GOLGA8HP0CJ92 632 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms