RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 LRRC41Q15345 812 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 C9orf50Q5SZB4 431 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 C12orf60Q5U649 245 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 OLFML2BQ68BL8 750 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 TMED8Q6PL24 325 aaPredicted RBP4.82□□□□□ -1.64
MDM1-215ENST00000545964 RPAP2Q8IXW5 612 aaPredicted RBP4.82□□□□□ -1.64
MDM1-215ENST00000545964 ZNF295-AS1Q8N0V1 137 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 MB21D1Q8N884 522 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 SHCBP1Q8NEM2 672 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 KIF1BPQ96EK5 621 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 ASIC4Q96FT7 647 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 MAML3Q96JK9 1138 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 MMP19Q99542 508 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 CDX2Q99626 313 aaPredicted RBP4.82□□□□□ -1.64
MDM1-215ENST00000545964 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.82□□□□□ -1.64
MDM1-215ENST00000545964 SH2D4AQ9H788 454 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 VCPKMTQ9H867 229 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 KANSL2Q9H9L4 492 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 MKNK2Q9HBH9 465 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 ATP8A2Q9NTI2 1148 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 FBXO28Q9NVF7 368 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 ZNF358Q9NW07 568 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 PAG1Q9NWQ8 432 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 SWAP70Q9UH65 585 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 TMX2Q9Y320 296 aa4.82□□□□□ -1.64
MDM1-215ENST00000545964 CTDP1Q9Y5B0 961 aaPredicted RBP4.82□□□□□ -1.64
MDM1-215ENST00000545964 PHIPQ8WWQ0 1821 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TCRBV5S4A2TA0A5A2 114 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TRIM43BA6NCK2 446 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 PQBP1O60828 265 aaKnown RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 ZBED4O75132 1171 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 RAB11FIP3O75154 756 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 SLC25A27O95847 323 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 APPP05067 770 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 RARBP10826 455 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 RAG1P15918 1043 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 ATP5JP18859 108 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 NOS3P29474 1203 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 ADD2P35612 726 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 FAM47AQ5JRC9 791 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 FAM83BQ5T0W9 1011 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 CTR9Q6PD62 1173 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 RNF180Q86T96 592 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TRIM50Q86XT4 487 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
MDM1-215ENST00000545964 SIRT2Q8IXJ6 389 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 DMRTC2Q8IXT2 367 aaPredicted RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 ABRAQ8N0Z2 381 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 CPXCR1Q8N123 301 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TPCN2Q8NHX9 752 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 DDX11Q96FC9 970 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 CALR3Q96L12 384 aaKnown RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 GUCD1Q96NT3 240 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 NUP88Q99567 741 aaPredicted RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 SLC30A3Q99726 388 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TINF2Q9BSI4 451 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 PUS7LQ9H0K6 701 aaKnown RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 TMEM39AQ9NV64 488 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TFIP11Q9UBB9 837 aaKnown RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 CLIP2Q9UDT6 1046 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 ISY1Q9ULR0 285 aaKnown RBP4.81□□□□□ -1.64
MDM1-215ENST00000545964 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 TACC3Q9Y6A5 838 aa4.81□□□□□ -1.64
MDM1-215ENST00000545964 DCDC2CA8MYV0 355 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 F5H6K3 240 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 VWA5AO00534 786 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 WDR46O15213 610 aaKnown RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 PRDM1O75626 825 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 IGHA2P01877 340 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 CLTBP09497 229 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 ITGB8P26012 769 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 ATP1A2P50993 1020 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 AFF1P51825 1210 aaKnown RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 EPHB4P54760 987 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 KLRC3Q07444 240 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 KCNA10Q16322 511 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 HIF1AQ16665 826 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 ZNF792Q3KQV3 632 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 ZSCAN25Q6NSZ9 544 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 LRRC69Q6ZNQ3 347 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 NOL8Q76FK4 1167 aaKnown RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 RIOX2Q8IUF8 465 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 ZNF444Q8N0Y2 327 aaPredicted RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 ANKRD35Q8N283 1001 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 TMEM130Q8N3G9 435 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 POU5F2Q8N7G0 328 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 MAFAQ8NHW3 353 aaPredicted RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.8□□□□□ -1.64
MDM1-215ENST00000545964 PPM1EQ8WY54 764 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 MYLIPQ8WY64 445 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 HAUS7Q99871 368 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 MRPL18Q9H0U6 180 aaKnown RBP4.8□□□□□ -1.64
MDM1-215ENST00000545964 AKTIPQ9H8T0 292 aa4.8□□□□□ -1.64
MDM1-215ENST00000545964 RAVER2Q9HCJ3 691 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms