RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GABPAQ06546 454 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 DNAJC21Q5F1R6 531 aaKnown RBP17.45■□□□□ 0.38
LDLR-204ENST00000545707 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 IQCDQ96DY2 449 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 FAM163AQ96GL9 167 aaPredicted RBP17.45■□□□□ 0.38
LDLR-204ENST00000545707 NOX5Q96PH1 765 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.45■□□□□ 0.38
LDLR-204ENST00000545707 PACSIN1Q9BY11 444 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 POLD4Q9HCU8 107 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 GAKO14976 1311 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 VGLL3A8MV65 326 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 PJA2O43164 708 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 PALMO75781 387 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 PRLRP16471 622 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 SCNN1DP51172 638 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 PSMD2Q13200 908 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 SHROOM1Q2M3G4 852 aaPredicted RBP17.45■□□□□ 0.38
LDLR-204ENST00000545707 HERC4Q5GLZ8 1057 aaPredicted RBP17.45■□□□□ 0.38
LDLR-204ENST00000545707 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
LDLR-204ENST00000545707 PAFAH1B1P43034 410 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 RAPGEF1Q13905 1077 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 SFMBT2Q5VUG0 894 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 PPP4R3AQ6IN85 833 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 PSTPIP2Q9H939 334 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 STIM2Q9P246 746 aa17.44■□□□□ 0.38
LDLR-204ENST00000545707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
LDLR-204ENST00000545707 TTLL1O95922 423 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 KLRC1P26715 233 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 CLK2P49760 499 aaKnown RBP17.43■□□□□ 0.38
LDLR-204ENST00000545707 PTPROQ16827 1216 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
LDLR-204ENST00000545707 CERS3Q8IU89 383 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 FAM76AQ8TAV0 307 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 CUL5Q93034 780 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 ADAMTS1Q9UHI8 967 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 ABCB11O95342 1321 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 CDK5RAP2Q96SN8 1893 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 A0A087X0T9 212 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 IGKV6D-41A0A0C4DH26 115 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 hCG_1984214I3L0E3 225 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 GLI1P08151 1106 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 PLA2G4BP0C869 781 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 FAM228BP0C875 321 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 C8orf74Q6P047 294 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 GPBP1Q86WP2 473 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 ZNF713Q8N859 430 aaPredicted RBP17.43■□□□□ 0.38
LDLR-204ENST00000545707 SCFD1Q8WVM8 642 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 ARL8AQ96BM9 186 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 CEP72Q9P209 647 aa17.43■□□□□ 0.38
LDLR-204ENST00000545707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.43■□□□□ 0.38
LDLR-204ENST00000545707 SSU72P8A0A1W2PR75 194 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 ACTN1P12814 892 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 SNAP25P60880 206 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 TRADDQ15628 312 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 SLF2Q8IX21 1173 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 BBXQ8WY36 941 aaPredicted RBP17.42■□□□□ 0.38
LDLR-204ENST00000545707 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
LDLR-204ENST00000545707 PCDHA2Q9Y5H9 948 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 SERPINB2P05120 415 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 FAM153BP0C7A2 387 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
LDLR-204ENST00000545707 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
LDLR-204ENST00000545707 FAM153CQ494X1 144 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 PROM2Q8N271 834 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 IFT81Q8WYA0 676 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 LRRC27Q9C0I9 530 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 GOLPH3Q9H4A6 298 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 USP40Q9NVE5 1235 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 FAM153AQ9UHL3 310 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
LDLR-204ENST00000545707 POTEFA5A3E0 1075 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 MEIS1O00470 390 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 MED24O75448 989 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 SERPING1P05155 500 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 SHMT1P34896 483 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 CASP5P51878 434 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 ADAM9Q13443 819 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 VPS72Q15906 364 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 POTEGQ6S5H5 508 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 ZBTB5O15062 677 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 KRT18P05783 430 aaKnown RBP17.41■□□□□ 0.38
LDLR-204ENST00000545707 PSMC6P62333 389 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 ITIH3Q06033 890 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
LDLR-204ENST00000545707 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms