RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PKDCCQ504Y2 493 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ASPRV1Q53RT3 343 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 GNASQ5JWF2 1037 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ANO1Q5XXA6 986 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 TTBK2Q6IQ55 1244 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ARMCX2Q7L311 632 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ZKSCAN3Q9BRR0 538 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ABHD16BQ9H3Z7 469 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 KAT14Q9H8E8 782 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 CYP39A1Q9NYL5 469 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-223ENST00000545440 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 DOCK5Q9H7D0 1870 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 SYNRGQ9UMZ2 1314 aa8.97□□□□□ -0.97
SNHG1-223ENST00000545440 LOC102724159A0A0B4J2E5 919 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 ASB14A6NK59 587 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 ADAMTS4O75173 837 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 CYP21A2P08686 494 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 SNAP25P60880 206 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 PTH1RQ03431 593 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 TRDNQ13061 729 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 PWP2Q15269 919 aaKnown RBP8.96□□□□□ -0.98
SNHG1-223ENST00000545440 BMP2KLQ5H9B9 411 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 MUM1L1Q5H9M0 696 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 GJC2Q5T442 439 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-223ENST00000545440 IFIT1BQ5T764 474 aaKnown RBP8.96□□□□□ -0.98
SNHG1-223ENST00000545440 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 RNF180Q86T96 592 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 CCDC144CPQ8IYA2 1237 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 HPS1Q92902 700 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 SENP6Q9GZR1 1112 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-223ENST00000545440 KATNBL1Q9H079 304 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 ZHX1Q9UKY1 873 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-223ENST00000545440 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 PHF24Q9UPV7 400 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 ASTN1O14525 1302 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 GBF1Q92538 1859 aa8.96□□□□□ -0.98
SNHG1-223ENST00000545440 LAMA3Q16787 3333 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 NFIBO00712 420 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 CDK2AP1O14519 115 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 DUSP11O75319 330 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 PARP1P09874 1014 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 BMP2P12643 396 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 CST5P28325 142 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 WEE1P30291 646 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 BMP8BP34820 402 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 FXR1P51114 621 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 CNTN2Q02246 1040 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 ACVR2BQ13705 512 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 SEC23AQ15436 765 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 CDC37Q16543 378 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 NSMFQ6X4W1 530 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 RALYLQ86SE5 291 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 MEIOBQ8N635 442 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 NCOA7Q8NI08 942 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 MORC4Q8TE76 937 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 LENG1Q96BZ8 264 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 GDF15Q99988 308 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 MAF1Q9H063 256 aa8.95□□□□□ -0.98
SNHG1-223ENST00000545440 UPF3AQ9H1J1 476 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 ZNF395Q9H8N7 513 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 POLMQ9NP87 494 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 ADD3Q9UEY8 706 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 ZMYND8Q9ULU4 1186 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 GNEQ9Y223 722 aaKnown RBP8.95□□□□□ -0.98
SNHG1-223ENST00000545440 TRIP12Q14669 1992 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 KAT6AQ92794 2004 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 E7EWF7 191 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 ADCY6O43306 1168 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 PGK1P00558 417 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 GOLGA8HP0CJ92 632 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 GPC1P35052 558 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 RTP1P59025 263 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 NKX3-2P78367 333 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 SART3Q15020 963 aaKnown RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 SLC30A10Q6XR72 485 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 SLC39A5Q6ZMH5 540 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 RNF207Q6ZRF8 634 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 CYB5R4Q7L1T6 521 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 SLC9A9Q8IVB4 645 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 CLEC4DQ8WXI8 215 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 KLF16Q9BXK1 252 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 VTA1Q9NP79 307 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 SCHIP1Q9P0W5 487 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
SNHG1-223ENST00000545440 ABCB11O95342 1321 aa8.94□□□□□ -0.98
SNHG1-223ENST00000545440 A0A1W2PQ45 241 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-223ENST00000545440 A0A1W2PQY0 241 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 ERICH2A1L162 156 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 DGAT1O75907 488 aa8.93□□□□□ -0.98
SNHG1-223ENST00000545440 ABL1P00519 1130 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms