RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 WDFY4Q6ZS81 3184 aa17.19■□□□□ 0.34
RTN3-214ENST00000545432 CACNA1HO95180 2353 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 H3BRB1 525 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 TREHO43280 583 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 GGPS1O95749 300 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 DLX2Q07687 328 aaPredicted RBP17.18■□□□□ 0.34
RTN3-214ENST00000545432 ASPRV1Q53RT3 343 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
RTN3-214ENST00000545432 MIER1Q8N108 512 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 ESR2Q92731 530 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 IL17RAQ96F46 866 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
RTN3-214ENST00000545432 RWDD3Q9Y3V2 267 aa17.18■□□□□ 0.34
RTN3-214ENST00000545432 EYA4O95677 639 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 SMIM10L2AP0DMW4 78 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 SMIM10L2BP0DMW5 78 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 UBA1P22314 1058 aaKnown RBP17.17■□□□□ 0.34
RTN3-214ENST00000545432 HAND2P61296 217 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 ADAM15Q13444 863 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 SMAD4Q13485 552 aaKnown RBP17.17■□□□□ 0.34
RTN3-214ENST00000545432 PKN1Q16512 942 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 PRSS33Q8NF86 280 aa17.17■□□□□ 0.34
RTN3-214ENST00000545432 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
RTN3-214ENST00000545432 ALG13Q9NP73 1137 aaKnown RBP17.17■□□□□ 0.34
RTN3-214ENST00000545432 GRM6O15303 877 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 CFBP00751 764 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 CAMK1Q14012 370 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 PGM5Q15124 567 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 FIBCD1Q8N539 461 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 MSLNLQ96KJ4 702 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 PHOX2BQ99453 314 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 PRRX2Q99811 253 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 C11orf84Q9BUA3 381 aaPredicted RBP17.16■□□□□ 0.34
RTN3-214ENST00000545432 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 IFIH1Q9BYX4 1025 aaKnown RBP17.16■□□□□ 0.34
RTN3-214ENST00000545432 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 MUTYHQ9UIF7 546 aa17.16■□□□□ 0.34
RTN3-214ENST00000545432 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 UPP2O95045 317 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 LGALS2P05162 132 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 ICAM3P32942 547 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 PDE1AP54750 535 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 CBX2Q14781 532 aaPredicted RBP17.15■□□□□ 0.34
RTN3-214ENST00000545432 CRIPAKQ8N1N5 446 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 ZKSCAN3Q9BRR0 538 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 BCAS3Q9H6U6 928 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 NEDD4P46934 1319 aa17.15■□□□□ 0.34
RTN3-214ENST00000545432 LOC730098B7Z3J9 87 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 PPP1R11O60927 126 aaPredicted RBP17.14■□□□□ 0.33
RTN3-214ENST00000545432 TBX10O75333 385 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 MMP1P03956 469 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 GNAT1P11488 350 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 PTPN5P54829 565 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 TRIM67Q6ZTA4 783 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 IQCA1Q86XH1 822 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 ENAHQ8N8S7 591 aaPredicted RBP17.14■□□□□ 0.33
RTN3-214ENST00000545432 IL31RAQ8NI17 732 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
RTN3-214ENST00000545432 P2RX5Q93086 422 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 KAT14Q9H8E8 782 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
RTN3-214ENST00000545432 ENPP3O14638 875 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 ST18O60284 1047 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 CTNNB1P35222 781 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 TCF15Q12870 199 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 NMIQ13287 307 aaPredicted RBP17.13■□□□□ 0.33
RTN3-214ENST00000545432 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 IER5LQ5T953 404 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
RTN3-214ENST00000545432 ZSCAN10Q96SZ4 725 aaPredicted RBP17.13■□□□□ 0.33
RTN3-214ENST00000545432 MLXIPQ9HAP2 919 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 TRIOO75962 3097 aa17.13■□□□□ 0.33
RTN3-214ENST00000545432 STXBP3O00186 592 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 KDM4AO75164 1064 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 CHRNA1P02708 482 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
RTN3-214ENST00000545432 MYCLP12524 364 aaPredicted RBP17.12■□□□□ 0.33
RTN3-214ENST00000545432 MGAT3Q09327 533 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 COASYQ13057 564 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 GPR20Q99678 358 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 VAT1LQ9HCJ6 419 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 ZSWIM5Q9P217 1185 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 PLAGL2Q9UPG8 496 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 ADGRA3Q8IWK6 1321 aa17.12■□□□□ 0.33
RTN3-214ENST00000545432 TTC3P53804 2025 aa17.11■□□□□ 0.33
RTN3-214ENST00000545432 TMEM221A6NGB7 291 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms