RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 AFMP43652 599 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 SARSP49591 514 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 JAG1P78504 1218 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 MAP3K10Q02779 954 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 IRF5Q13568 498 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 MORC3Q14149 939 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 DHX8Q14562 1220 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 RRP1BQ14684 758 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 IL17AQ16552 155 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 UBE2SQ16763 222 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 ISM2Q6H9L7 571 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 PPP4R3AQ6IN85 833 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 MIGA2Q7L4E1 593 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 APOBEC3FQ8IUX4 373 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 GRAMD1CQ8IYS0 662 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 SPICE1Q8N0Z3 855 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 ACER1Q8TDN7 264 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 CCDC47Q96A33 483 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 CALML4Q96GE6 196 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 GTPBP4Q9BZE4 634 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 TMEM60Q9H2L4 133 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 VCPKMTQ9H867 229 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 CNOT7Q9UIV1 285 aaKnown RBP7.92□□□□□ -1.14
SPPL3-209ENST00000545209 FEM1BQ9UK73 627 aa7.92□□□□□ -1.14
SPPL3-209ENST00000545209 A0A1W2PRG0 241 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 SHTN1A0MZ66 631 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 AP5Z1O43299 807 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 LMNB1P20700 586 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
SPPL3-209ENST00000545209 ECE1P42892 770 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 USP11P51784 963 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 RAB15P59190 212 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 DPYDQ12882 1025 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 KARSQ15046 597 aaKnown RBP7.91□□□□□ -1.14
SPPL3-209ENST00000545209 TBC1D10BQ4KMP7 808 aaPredicted RBP7.91□□□□□ -1.14
SPPL3-209ENST00000545209 FAM83BQ5T0W9 1011 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
SPPL3-209ENST00000545209 MOXD1Q6UVY6 613 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 CABP7Q86V35 215 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 SPC24Q8NBT2 197 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 NLGN2Q8NFZ4 835 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 LPAR1Q92633 364 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 KIFC2Q96AC6 838 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 CDK5RAP3Q96JB5 506 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 ANO3Q9BYT9 981 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 EHMT1Q9H9B1 1298 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
SPPL3-209ENST00000545209 PRR12Q9ULL5 1215 aa7.91□□□□□ -1.14
SPPL3-209ENST00000545209 ZNF541Q9H0D2 1346 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 SLC26A4O43511 780 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 CTNND1O60716 968 aaKnown RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 TDP2O95551 362 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 LMOD1P29536 600 aaPredicted RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 TXKP42681 527 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 ABL2P42684 1182 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 AMPD3Q01432 767 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 PDIA5Q14554 519 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 USH1GQ495M9 461 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 GPC2Q8N158 579 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 IGSF22Q8N9C0 903 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 ENOX1Q8TC92 643 aaKnown RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 MTMR9Q96QG7 549 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 ZNF341Q9BYN7 854 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 LRRC27Q9C0I9 530 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 KIAA1683Q9H0B3 1180 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 DEFB129Q9H1M3 183 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 RRAGDQ9NQL2 400 aaPredicted RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 STK17AQ9UEE5 414 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 LRWD1Q9UFC0 647 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 PGAP2Q9UHJ9 254 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 HACL1Q9UJ83 578 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 PNMA2Q9UL42 364 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 MRPL11Q9Y3B7 192 aaKnown RBP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 PPP2R3BQ9Y5P8 575 aa7.9□□□□□ -1.14
SPPL3-209ENST00000545209 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
SPPL3-209ENST00000545209 ABCB11O95342 1321 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 SYNRGQ9UMZ2 1314 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 KDM3AQ9Y4C1 1321 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 PP2D1A8MPX8 630 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 WDR46O15213 610 aaKnown RBP7.89□□□□□ -1.15
SPPL3-209ENST00000545209 SLC37A4O43826 429 aa7.89□□□□□ -1.15
SPPL3-209ENST00000545209 NRDCO43847 1150 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms