RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 GOLGA6L9A6NEM1 432 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 MEIS1O00470 390 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 KIF20AO95235 890 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 FXR1P51114 621 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHFR-224ENST00000545046 LRRC41Q15345 812 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 HERC4Q5GLZ8 1057 aaPredicted RBP18.48■□□□□ 0.55
CHFR-224ENST00000545046 FOXR2Q6PJQ5 311 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 REXO1L1PQ8IX06 675 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
CHFR-224ENST00000545046 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 B4DLN1 442 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 ZBED4O75132 1171 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 PSMD10O75832 226 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 ALAS1P13196 640 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 VCAM1P19320 739 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 SPP2Q13103 211 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 OTOP1Q7RTM1 612 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 EEF2KMTQ96G04 330 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 ZNF577Q9BSK1 485 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 RPAP3Q9H6T3 665 aaPredicted RBP18.48■□□□□ 0.55
CHFR-224ENST00000545046 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
CHFR-224ENST00000545046 TUFT1Q9NNX1 390 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 EMILIN3Q9NT22 766 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
CHFR-224ENST00000545046 NPHP3-ACAD11A0A0J9YXS1 232 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 GAS7O60861 476 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 FDX1P10109 184 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 PSMC6P62333 389 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 CYP4A11Q02928 519 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 TBC1D8BQ0IIM8 1120 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 PABPC4Q13310 644 aaKnown RBP eCLIP18.47■□□□□ 0.55
CHFR-224ENST00000545046 PPP2R5CQ13362 524 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 DGKZQ13574 1117 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 ARSHQ5FYA8 562 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 KRT26Q7Z3Y9 468 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 GPC2Q8N158 579 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 SAMD3Q8N6K7 520 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 WRNIP1Q96S55 665 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 MAP3K20Q9NYL2 800 aaKnown RBP18.47■□□□□ 0.55
CHFR-224ENST00000545046 EML1O00423 815 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 LMNB1P20700 586 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 MXRA8Q9BRK3 442 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 WDR11Q9BZH6 1224 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 ZHX3Q9H4I2 956 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 TBC1D7Q9P0N9 293 aa18.47■□□□□ 0.55
CHFR-224ENST00000545046 RBBP6Q7Z6E9 1792 aaKnown RBP18.46■□□□□ 0.55
CHFR-224ENST00000545046 EYA4O95677 639 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 BACE1P56817 501 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
CHFR-224ENST00000545046 FKBP15Q5T1M5 1219 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 TOGARAM2Q6ZUX3 1019 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 TMTC1Q8IUR5 882 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 ZNF280CQ8ND82 737 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 ZKSCAN4Q969J2 545 aaPredicted RBP18.46■□□□□ 0.55
CHFR-224ENST00000545046 ABHD10Q9NUJ1 306 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 PPP2R3BQ9Y5P8 575 aa18.46■□□□□ 0.55
CHFR-224ENST00000545046 FRMD3A2A2Y4 597 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 SOWAHDA6NJG2 315 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 NFIBO00712 420 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 KRT9P35527 623 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 GIT2Q14161 759 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 PRAMEF18Q5VWM3 479 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 SYT10Q6XYQ8 523 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 GLIS3Q8NEA6 775 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 UPF1Q92900 1129 aaKnown RBP eCLIP18.45■□□□□ 0.541e-7■■■□□ 15.9
CHFR-224ENST00000545046 NUP58Q9BVL2 599 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 TEKT3Q9BXF9 490 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 RGL1Q9NZL6 768 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 LUC7L2Q9Y383 392 aaKnown RBP18.45■□□□□ 0.54
CHFR-224ENST00000545046 PCDHA2Q9Y5H9 948 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 CHMP2AO43633 222 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 CCDC175P0C221 793 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 PTPRAP18433 802 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 MUTP22033 750 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 FECHP22830 423 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 GHRHRQ02643 423 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 TSR1Q2NL82 804 aaKnown RBP18.45■□□□□ 0.54
CHFR-224ENST00000545046 HSD17B14Q9BPX1 270 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 PARP14Q460N5 1801 aa18.45■□□□□ 0.54
CHFR-224ENST00000545046 ARP10275 920 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 ETF1P62495 437 aaKnown RBP18.44■□□□□ 0.54
CHFR-224ENST00000545046 MIIPQ5JXC2 388 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 CYP26C1Q6V0L0 522 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 TPH2Q8IWU9 490 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 DYDC2Q96IM9 177 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 ZFP91Q96JP5 570 aaPredicted RBP18.44■□□□□ 0.54
CHFR-224ENST00000545046 BHMT2Q9H2M3 363 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 CAPN11Q9UMQ6 739 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 RPTORQ8N122 1335 aa18.44■□□□□ 0.54
CHFR-224ENST00000545046 FKBP3Q00688 224 aaKnown RBP18.44■□□□□ 0.54
CHFR-224ENST00000545046 CTTNQ14247 550 aaKnown RBP18.44■□□□□ 0.54
CHFR-224ENST00000545046 MTF1Q14872 753 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms