RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
SNHG1-221ENST00000544983 ARP10275 920 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 SP2Q02086 613 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 ARHGAP1Q07960 439 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 RESTQ13127 1097 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 KLHDC9Q8NEP7 349 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 OR6J1Q8NGC5 347 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 SLC5A5Q92911 643 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 ZFP91Q96JP5 570 aaPredicted RBP13.3□□□□□ -0.28
SNHG1-221ENST00000544983 JPH1Q9HDC5 661 aaPredicted RBP13.3□□□□□ -0.28
SNHG1-221ENST00000544983 KCNMB3Q9NPA1 279 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
SNHG1-221ENST00000544983 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
SNHG1-221ENST00000544983 MOXD2PA6NHM9 499 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 KBTBD13C9JR72 458 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 DNM1LO00429 736 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 MSH4O15457 936 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 ADCY6O43306 1168 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 MARCH6O60337 910 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 CABYRO75952 493 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 FARP2O94887 1054 aaPredicted RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 C6orf222P0C671 652 aaPredicted RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 HOXD8P13378 290 aaPredicted RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 MCM7P33993 719 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 KRT76Q01546 638 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 CALCRLQ16602 461 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 DGKDQ16760 1214 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
SNHG1-221ENST00000544983 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 ETNPPLQ8TBG4 499 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 SLC9A2Q9UBY0 812 aa13.29□□□□□ -0.28
SNHG1-221ENST00000544983 DHX15O43143 795 aaKnown RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 SLC37A4O43826 429 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 GAS7O60861 476 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 ATP9AO75110 1047 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 BRD1O95696 1058 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 F13A1P00488 732 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 PGK1P00558 417 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 SFNP31947 248 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 DDIT3P35638 169 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 PRPHP41219 470 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 LRRC41Q15345 812 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 LRCH2Q5VUJ6 765 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 SEPT1Q8WYJ6 367 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 ZNF396Q96N95 335 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 SEZ6LQ9BYH1 1024 aa13.28□□□□□ -0.28
SNHG1-221ENST00000544983 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 MORC2Q9Y6X9 1032 aaPredicted RBP13.28□□□□□ -0.28
SNHG1-221ENST00000544983 PSMD10O75832 226 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 ATP2B1P20020 1258 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 JAK3P52333 1124 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 ITGB3BPQ13352 177 aaPredicted RBP13.27□□□□□ -0.29
SNHG1-221ENST00000544983 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 ZNF174Q15697 407 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 ANO1Q5XXA6 986 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
SNHG1-221ENST00000544983 CCSAPQ6IQ19 270 aaPredicted RBP13.27□□□□□ -0.29
SNHG1-221ENST00000544983 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 AFG1LQ8WV93 481 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
SNHG1-221ENST00000544983 MTMR9Q96QG7 549 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 RAB34Q9BZG1 259 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
SNHG1-221ENST00000544983 WDR64B1ANS9 1081 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 CTAGE5O15320 804 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 ELP1O95163 1332 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 ATG7O95352 703 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 MMP3P08254 477 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 OR52Z1P0C646 297 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 SLC26A2P50443 739 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 PTGDRQ13258 359 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 KCNA10Q16322 511 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 HSDL1Q3SXM5 330 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 TMEM63BQ5T3F8 832 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 GJC2Q5T442 439 aaPredicted RBP13.26□□□□□ -0.29
SNHG1-221ENST00000544983 HAS1Q92839 578 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 COPS5Q92905 334 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
SNHG1-221ENST00000544983 LENG1Q96BZ8 264 aaPredicted RBP13.26□□□□□ -0.29
SNHG1-221ENST00000544983 GPR20Q99678 358 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 KATNAL1Q9BW62 490 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 CFAP45Q9UL16 551 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 PHF24Q9UPV7 400 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 PCDHB6Q9Y5E3 794 aa13.26□□□□□ -0.29
SNHG1-221ENST00000544983 FRMPD3Q5JV73 1810 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms