RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CPA1P15085 419 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 IGFBP4P22692 258 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 METAP2P50579 478 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 SNAP25P60880 206 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 PSMC6P62333 389 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 MRPS5P82675 430 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 PURAQ00577 322 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 TRAF1Q13077 416 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 RRP12Q5JTH9 1297 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 GPATCH4Q5T3I0 446 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 BTNL9Q6UXG8 535 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 NSMFQ6X4W1 530 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 EEPD1Q7L9B9 569 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 RPUSD2Q8IZ73 545 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 FANCBQ8NB91 859 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 CTCFLQ8NI51 663 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 DCAF4Q8WV16 495 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 KAT14Q9H8E8 782 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 ADD3Q9UEY8 706 aaKnown RBP7.57□□□□□ -1.2
CDCA3-209ENST00000544610 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 SLC4A7Q9Y6M7 1214 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 GOLGA8BA8MQT2 603 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 hCG_1984214I3L0E3 225 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 NFIBO00712 420 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 SUPT20HL2P0C7V6 817 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 ATP2A2P16615 1042 aaKnown RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 CPT1AP50416 773 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 ALDH5A1P51649 535 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 RABGGTBP53611 331 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 SCRN1Q12765 414 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 BAATQ14032 418 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 NTRK3Q16288 839 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 RTN1Q16799 776 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 CCDC96Q2M329 555 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 ASPRV1Q53RT3 343 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 ZNF713Q8N859 430 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 PNMA1Q8ND90 353 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 NSUN7Q8NE18 718 aaKnown RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 OXER1Q8TDS5 423 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 SCLYQ96I15 445 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 MAF1Q9H063 256 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 INCENPQ9NQS7 918 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 TRMT13Q9NUP7 481 aaKnown RBP7.56□□□□□ -1.2
CDCA3-209ENST00000544610 POLR3EQ9NVU0 708 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 PNMA2Q9UL42 364 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 ATP6V1DQ9Y5K8 247 aa7.56□□□□□ -1.2
CDCA3-209ENST00000544610 GBF1Q92538 1859 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 TRANK1O15050 2925 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 GOLGA8AA7E2F4 631 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 CYP2C9P11712 490 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 MYOGP15173 224 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 XBP1P17861 261 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 COL9A1P20849 921 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 EDNRBP24530 442 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 RFC2P35250 354 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 SLC16A2P36021 539 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 COL9A3Q14050 684 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 GRM4Q14833 912 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 CCDC85BQ15834 202 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 SYDE2Q5VT97 1194 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 ATL3Q6DD88 541 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 TTBK2Q6IQ55 1244 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 OR6J1Q8NGC5 347 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 CLEC4DQ8WXI8 215 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 TCEANC2Q96MN5 208 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 MTG1Q9BT17 334 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 SPZ1Q9BXG8 430 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 WDR11Q9BZH6 1224 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 SH3GLB2Q9NR46 395 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
CDCA3-209ENST00000544610 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
CDCA3-209ENST00000544610 FRMPD2Q68DX3 1309 aaPredicted RBP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 TANC1Q9C0D5 1861 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 PTPDC1A2A3K4 754 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 NKRFO15226 690 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 PRPF3O43395 683 aaKnown RBP7.54□□□□□ -1.2
CDCA3-209ENST00000544610 DEXIO95424 95 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 LARGE1O95461 756 aa7.54□□□□□ -1.2
CDCA3-209ENST00000544610 BRD1O95696 1058 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms