RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 BCAS3Q9H6U6 928 aa15.94■□□□□ 0.14
VAMP1-208ENST00000544432 MTMR10Q9NXD2 777 aa15.94■□□□□ 0.14
VAMP1-208ENST00000544432 HDAC6Q9UBN7 1215 aa15.94■□□□□ 0.14
VAMP1-208ENST00000544432 NOD1Q9Y239 953 aa15.94■□□□□ 0.14
VAMP1-208ENST00000544432 MYH7BA7E2Y1 1941 aa15.94■□□□□ 0.14
VAMP1-208ENST00000544432 NOP56O00567 594 aaKnown RBP15.93■□□□□ 0.14
VAMP1-208ENST00000544432 ZNF286BP0CG31 522 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 ANAPC15P60006 121 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 RBL2Q08999 1139 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 PKN1Q16512 942 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 VWCEQ96DN2 955 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 RNF26Q9BY78 433 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-208ENST00000544432 ZMYND12Q9H0C1 365 aa15.93■□□□□ 0.14
VAMP1-208ENST00000544432 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
VAMP1-208ENST00000544432 TMEM265A0A087WTH1 108 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 H3BRB1 525 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 SORBS3O60504 671 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 LGALS2P05162 132 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 IQCF3P0C7M6 154 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 KCNA2P16389 499 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 HOXC8P31273 242 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 SREBF1P36956 1147 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 CHMP4BP1P59074 171 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 AKAP17AQ02040 695 aaKnown RBP15.92■□□□□ 0.14
VAMP1-208ENST00000544432 PTK7Q13308 1070 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 MTMR1Q13613 665 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 PPP1R13LQ8WUF5 828 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 IL17RAQ96F46 866 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 SCLYQ96I15 445 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 MXRA8Q9BRK3 442 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 ANO3Q9BYT9 981 aa15.92■□□□□ 0.14
VAMP1-208ENST00000544432 TUT1Q9H6E5 874 aaKnown RBP15.92■□□□□ 0.14
VAMP1-208ENST00000544432 ATP9AO75110 1047 aa15.91■□□□□ 0.14
VAMP1-208ENST00000544432 PARNO95453 639 aaKnown RBP15.91■□□□□ 0.14
VAMP1-208ENST00000544432 ZNF697Q5TEC3 545 aa15.91■□□□□ 0.14
VAMP1-208ENST00000544432 Q7L0L9 218 aa15.91■□□□□ 0.14
VAMP1-208ENST00000544432 C6orf50Q9HD87 102 aa15.91■□□□□ 0.14
VAMP1-208ENST00000544432 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
VAMP1-208ENST00000544432 MEIS1O00470 390 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 GNA11P29992 359 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 CEP55Q53EZ4 464 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-208ENST00000544432 CRYGNQ8WXF5 182 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 SEPT1Q8WYJ6 367 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 DHX38Q92620 1227 aaKnown RBP15.9■□□□□ 0.14
VAMP1-208ENST00000544432 PHKBQ93100 1093 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
VAMP1-208ENST00000544432 SEMA6BQ9H3T3 888 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 SH3GLB2Q9NR46 395 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 NFASCO94856 1347 aa15.9■□□□□ 0.14
VAMP1-208ENST00000544432 CYP3A4P08684 503 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 SELPP16109 830 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 CCT2P78371 535 aaKnown RBP15.89■□□□□ 0.13
VAMP1-208ENST00000544432 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 TRIM71Q2Q1W2 868 aaKnown RBP15.89■□□□□ 0.13
VAMP1-208ENST00000544432 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 CCDC148Q8NFR7 591 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 BICD2Q8TD16 824 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 SLC26A6Q9BXS9 759 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 NCOA5Q9HCD5 579 aaKnown RBP15.89■□□□□ 0.13
VAMP1-208ENST00000544432 KCNH7Q9NS40 1196 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 TMEM260Q9NX78 707 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 CXXC1Q9P0U4 656 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-208ENST00000544432 ZNF215Q9UL58 517 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-208ENST00000544432 STXBP5LQ9Y2K9 1186 aa15.89■□□□□ 0.13
VAMP1-208ENST00000544432 GSTTP1A0A1W2PQM5 241 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 C17orf102A2RUQ5 167 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 SMIM10L2AP0DMW4 78 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 SMIM10L2BP0DMW5 78 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 GNAT1P11488 350 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 CKBP12277 381 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 ACTN1P12814 892 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 SSRP1Q08945 709 aaKnown RBP15.88■□□□□ 0.13
VAMP1-208ENST00000544432 HIC1Q14526 733 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 CPLX2Q6PUV4 134 aaKnown RBP15.88■□□□□ 0.13
VAMP1-208ENST00000544432 OTOP2Q7RTS6 562 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 SERINC5Q86VE9 423 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 REXO1Q8N1G1 1221 aaKnown RBP15.88■□□□□ 0.13
VAMP1-208ENST00000544432 CYP2W1Q8TAV3 490 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 RNPEPQ9H4A4 650 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 TELO2Q9Y4R8 837 aa15.88■□□□□ 0.13
VAMP1-208ENST00000544432 COL6A3P12111 3177 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 CPLX1O14810 134 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 CXCL10P02778 98 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 DNAJB2P25686 324 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 TCF7P36402 384 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-208ENST00000544432 ZNF200P98182 395 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-208ENST00000544432 GPNMBQ14956 572 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 UTP14CQ5TAP6 766 aaKnown RBP15.87■□□□□ 0.13
VAMP1-208ENST00000544432 JAKMIP3Q5VZ66 844 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 LRRC8DQ7L1W4 858 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 DEFB128Q7Z7B8 93 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 ATP6V0A1Q93050 837 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 PGBD1Q96JS3 809 aa15.87■□□□□ 0.13
VAMP1-208ENST00000544432 TTYH1Q9H313 450 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-208ENST00000544432 SMARCAD1Q9H4L7 1026 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms