RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 KIFAP3Q92845 792 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 NSUN4Q96CB9 384 aaKnown RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 HDAC9Q9UKV0 1011 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 N4BP1O75113 896 aaKnown RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 ALAS1P13196 640 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 FAM102BQ5T8I3 360 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 CASC4Q6P4E1 433 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 VPS52Q8N1B4 723 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 SH2D3CQ8N5H7 860 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 IFT74Q96LB3 600 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 RAB17Q9H0T7 212 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 TXNDC9O14530 226 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 RAD17O75943 681 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 SLFN13Q68D06 897 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 HIBCHQ6NVY1 386 aaPredicted RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 RAD9BQ6WBX8 426 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 SYCE1Q8N0S2 351 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 MAK16Q9BXY0 300 aaKnown RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 CD209Q9NNX6 404 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 INTS9Q9NV88 658 aaKnown RBP14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 GJA3Q9Y6H8 435 aa14.12□□□□□ -0.15
TUBGCP2-210ENST00000543663 EIF3CLB5ME19 914 aaKnown RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 K7ENM7 598 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 PRPF3O43395 683 aaKnown RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TFRCP02786 760 aaKnown RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 PPP2R5CQ13362 524 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 CLEC4GQ6UXB4 293 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 DHTKD1Q96HY7 919 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 EIF3CQ99613 913 aaKnown RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TTLL3Q9Y4R7 772 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 CDK8P49336 464 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 EPHB4P54760 987 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 GPSM2P81274 684 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TXNRD1Q16881 649 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 RETREG2Q8NC44 543 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 LZTS2Q9BRK4 669 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 AFF2P51816 1311 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 THAP12O43422 761 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 STAMBPO95630 424 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TAOK1Q7L7X3 1001 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 TMEM47Q9BQJ4 181 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L5A8MUK1 530 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 PPFIA4O75335 1185 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 GAS8O95995 478 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 GRM1Q13255 1194 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 GRAPQ13588 217 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 NOA1Q8NC60 698 aaKnown RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 PPFIBP2Q8ND30 876 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 GRAPLQ8TC17 118 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 PIGOQ8TEQ8 1089 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 LBHD1Q9BQE6 289 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 FAM169AQ9Y6X4 670 aa14.11□□□□□ -0.15
TUBGCP2-210ENST00000543663 LRRC53A6NM62 1247 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 PPIP5K2O43314 1243 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 TMOD1P28289 359 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 TRAF1Q13077 416 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 USP17L6PQ6QN14 398 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 MRC1P22897 1456 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ATP8B1O43520 1251 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 PALMO75781 387 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 NR1D1P20393 614 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ICA1Q05084 483 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ACTN3Q08043 901 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ZNF211Q13398 564 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 CERKLQ49MI3 558 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ALKBH5Q6P6C2 394 aaKnown RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 LARGE2Q8N3Y3 721 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 NUCKS1Q9H1E3 243 aaKnown RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 DAAM1Q9Y4D1 1078 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 MTMR3Q13615 1198 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 GDAP1Q8TB36 358 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 CEP95Q96GE4 821 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 DDX47Q9H0S4 455 aaKnown RBP14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 BHMT2Q9H2M3 363 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 ZNF148Q9UQR1 794 aa14.1□□□□□ -0.15
TUBGCP2-210ENST00000543663 WDR91A4D1P6 747 aa14.09□□□□□ -0.15
TUBGCP2-210ENST00000543663 TRPC3Q13507 836 aa14.09□□□□□ -0.15
TUBGCP2-210ENST00000543663 XKR9Q5GH70 373 aa14.09□□□□□ -0.15
TUBGCP2-210ENST00000543663 ANKRD20A3Q5VUR7 823 aa14.09□□□□□ -0.15
TUBGCP2-210ENST00000543663 CCDC13Q8IYE1 715 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms