RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ANKLE1Q8NAG6 615 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 AFG1LQ8WV93 481 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 TNFRSF25Q93038 417 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 FERMT2Q96AC1 680 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 TEKT3Q9BXF9 490 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 SENP6Q9GZR1 1112 aaPredicted RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 AGO4Q9HCK5 861 aaKnown RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 JPH1Q9HDC5 661 aaPredicted RBP7.15□□□□□ -1.26
LTBR-212ENST00000543542 TBC1D22BQ9NU19 505 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 POLR3EQ9NVU0 708 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 SLC9A2Q9UBY0 812 aa7.15□□□□□ -1.26
LTBR-212ENST00000543542 IGLV3-22A0A075B6J6 115 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MYADML2A6NDP7 307 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 DNM1LO00429 736 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 BACH1O14867 736 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MSH4O15457 936 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 CHMP2AO43633 222 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 NEMFO60524 1076 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 KPNA6O60684 536 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 ADAMTS4O75173 837 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 NFASCO94856 1347 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MMP3P08254 477 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 KCNA2P16389 499 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 U2AF2P26368 475 aaKnown RBP eCLIP7.14□□□□□ -1.27
LTBR-212ENST00000543542 TXKP42681 527 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 TRAPPC10P48553 1259 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 ACLYP53396 1101 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 IRX5P78411 483 aaPredicted RBP7.14□□□□□ -1.27
LTBR-212ENST00000543542 ARHGAP1Q07960 439 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 SEMA3FQ13275 785 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 RILPL1Q5EBL4 403 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 MOXD1Q6UVY6 613 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 METTL7BQ6UX53 244 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 POTEDQ86YR6 584 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 CRYGNQ8WXF5 182 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 SEPT1Q8WYJ6 367 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 GLG1Q92896 1179 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 PAWRQ96IZ0 340 aaKnown RBP7.14□□□□□ -1.27
LTBR-212ENST00000543542 GLT1D1Q96MS3 346 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 SENP7Q9BQF6 1050 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 TSEN34Q9BSV6 310 aaKnown RBP7.14□□□□□ -1.27
LTBR-212ENST00000543542 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 UPF3AQ9H1J1 476 aaKnown RBP7.14□□□□□ -1.27
LTBR-212ENST00000543542 ZSCAN16Q9H4T2 348 aaPredicted RBP7.14□□□□□ -1.27
LTBR-212ENST00000543542 C11orf49Q9H6J7 331 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 AZI2Q9H6S1 392 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 STARD7Q9NQZ5 370 aa7.14□□□□□ -1.27
LTBR-212ENST00000543542 ELP1O95163 1332 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CYP3A7-CYP3A51PA0A087WV96 503 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 A0A1W2PQ45 241 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 A0A1W2PQY0 241 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 SLC37A4O43826 429 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CABYRO75952 493 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 PSAPP07602 524 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CYP3A7P24462 503 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CST5P28325 142 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 TCF7P36402 384 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 KRT76Q01546 638 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 ITGB3BPQ13352 177 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 ORC2Q13416 577 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 NBR1Q14596 966 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 TMEM266Q2M3C6 531 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 HSDL1Q3SXM5 330 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 FOXD4L6Q3SYB3 417 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 FAM47CQ5HY64 1035 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 FAM160B1Q5W0V3 765 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 NCAPH2Q6IBW4 605 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 MIS18BP1Q6P0N0 1132 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CXCL17Q6UXB2 119 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 FOXD4L3Q6VB84 417 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 MIER3Q7Z3K6 550 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 CKAP2LQ8IYA6 745 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 SLFN12Q8IYM2 578 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 KLHDC9Q8NEP7 349 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 PPTC7Q8NI37 304 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 DIS3LQ8TF46 1054 aaKnown RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 GJA10Q969M2 543 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 EMID1Q96A84 441 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 FAM20AQ96MK3 541 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 RIT2Q99578 217 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 GPR20Q99678 358 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 MTG1Q9BT17 334 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 KATNAL1Q9BW62 490 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 BCAS3Q9H6U6 928 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 ZNF215Q9UL58 517 aaPredicted RBP7.13□□□□□ -1.27
LTBR-212ENST00000543542 CEP131Q9UPN4 1083 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 MTMR6Q9Y217 621 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 MYH15Q9Y2K3 1946 aa7.13□□□□□ -1.27
LTBR-212ENST00000543542 A0A0U1RQG5 324 aaPredicted RBP7.12□□□□□ -1.27
LTBR-212ENST00000543542 A6NJR5 290 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 WDR64B1ANS9 1081 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 TBX3O15119 743 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 PPFIA4O75335 1185 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 F13A1P00488 732 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 OR52Z1P0C646 297 aa7.12□□□□□ -1.27
LTBR-212ENST00000543542 ZNF286BP0CG31 522 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms