RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 CYFIP1Q7L576 1253 aa20.92■□□□□ 0.94
COPS7A-216ENST00000543170 C7orf61Q8IZ16 206 aa20.92■□□□□ 0.94
COPS7A-216ENST00000543170 CCDC194A0A1B0GVG4 234 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 NOP56O00567 594 aaKnown RBP20.91■□□□□ 0.94
COPS7A-216ENST00000543170 F2P00734 622 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 ITGA7Q13683 1181 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
COPS7A-216ENST00000543170 PLA2G4DQ86XP0 818 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 FAM184AQ8NB25 1140 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 TNFRSF25Q93038 417 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 VTI1AQ96AJ9 217 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 GPR20Q99678 358 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 KATNAL1Q9BW62 490 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 AGO4Q9HCK5 861 aaKnown RBP20.91■□□□□ 0.94
COPS7A-216ENST00000543170 ATP11BQ9Y2G3 1177 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 KIF3AQ9Y496 699 aa20.91■□□□□ 0.94
COPS7A-216ENST00000543170 GRIN2DO15399 1336 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 EDIL3O43854 480 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 ARP10275 920 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 NFRKBQ6P4R8 1299 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 OXER1Q8TDS5 423 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 LENG9Q96B70 501 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 SDF4Q9BRK5 362 aa20.9■□□□□ 0.94
COPS7A-216ENST00000543170 JPH1Q9HDC5 661 aaPredicted RBP20.9■□□□□ 0.94
COPS7A-216ENST00000543170 CEP290O15078 2479 aa20.89■□□□□ 0.94
COPS7A-216ENST00000543170 CYP3A7-CYP3A51PA0A087WV96 503 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 CYP3A7P24462 503 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 PSMC6P62333 389 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 PTPN11Q06124 597 aaPredicted RBP20.89■□□□□ 0.93
COPS7A-216ENST00000543170 FAM126BQ8IXS8 530 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 DIS3L2Q8IYB7 885 aaKnown RBP20.89■□□□□ 0.93
COPS7A-216ENST00000543170 KAT2BQ92831 832 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 MBOAT7Q96N66 472 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 NAP1L4Q99733 375 aaKnown RBP20.89■□□□□ 0.93
COPS7A-216ENST00000543170 BCAS3Q9H6U6 928 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.89■□□□□ 0.93
COPS7A-216ENST00000543170 LTBP2Q14767 1821 aa20.89■□□□□ 0.93
COPS7A-216ENST00000543170 HAS3O00219 553 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 SORBS3O60504 671 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 GCFC2P16383 781 aaKnown RBP20.88■□□□□ 0.93
COPS7A-216ENST00000543170 TLE2Q04725 743 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 ITGB3BPQ13352 177 aaPredicted RBP20.88■□□□□ 0.93
COPS7A-216ENST00000543170 CUL4AQ13619 759 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 SAFBQ15424 915 aaKnown RBP eCLIP20.88■□□□□ 0.93
COPS7A-216ENST00000543170 INF2Q27J81 1249 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 Q4G0T1 1027 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 PRR16Q569H4 304 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 PIK3AP1Q6ZUJ8 805 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 NEK8Q86SG6 692 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 SESTD1Q86VW0 696 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 FBXO18Q8NFZ0 1043 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 PDLIM7Q9NR12 457 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 SLC9A2Q9UBY0 812 aa20.88■□□□□ 0.93
COPS7A-216ENST00000543170 DCDC2CA8MYV0 355 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 IPO5O00410 1097 aaKnown RBP20.87■□□□□ 0.93
COPS7A-216ENST00000543170 TLR3O15455 904 aaKnown RBP20.87■□□□□ 0.93
COPS7A-216ENST00000543170 PQBP1O60828 265 aaKnown RBP20.87■□□□□ 0.93
COPS7A-216ENST00000543170 LGALS2P05162 132 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 CLTBP09497 229 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 ZNF286BP0CG31 522 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 NR5A1Q13285 461 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 SEPT1Q8WYJ6 367 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 C16orf70Q9BSU1 422 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 TBC1D22BQ9NU19 505 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
COPS7A-216ENST00000543170 BTBD18B2RXH4 712 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 H0YGN5 161 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 CD4P01730 458 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 FOSBP53539 338 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 MFSD10Q14728 455 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 NBPF20Q3BBV1 942 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 SNX21Q969T3 373 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 ZNF577Q9BSK1 485 aa20.86■□□□□ 0.93
COPS7A-216ENST00000543170 FOXP1Q9H334 677 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-216ENST00000543170 EMSYQ7Z589 1322 aa20.85■□□□□ 0.93
COPS7A-216ENST00000543170 DHX15O43143 795 aaKnown RBP20.85■□□□□ 0.93
COPS7A-216ENST00000543170 TDP2O95551 362 aa20.85■□□□□ 0.93
COPS7A-216ENST00000543170 TCF7P36402 384 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-216ENST00000543170 PSEN2P49810 448 aa20.85■□□□□ 0.93
COPS7A-216ENST00000543170 FAAP100Q0VG06 881 aa20.85■□□□□ 0.93
COPS7A-216ENST00000543170 EARS2Q5JPH6 523 aaKnown RBP20.85■□□□□ 0.93
COPS7A-216ENST00000543170 PRKAG2Q9UGJ0 569 aa20.85■□□□□ 0.93
COPS7A-216ENST00000543170 ZNF215Q9UL58 517 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-216ENST00000543170 GSTTP1A0A1W2PQM5 241 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 H3BRB1 525 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 K7ELQ4 463 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-216ENST00000543170 KIAA0355O15063 1070 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 MSH4O15457 936 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 GJB2P29033 226 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 ACTR2P61160 394 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 SP4Q02446 784 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 KIAA0753Q2KHM9 967 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 LETM2Q2VYF4 491 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 RIT2Q99578 217 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 TUT1Q9H6E5 874 aaKnown RBP20.84■□□□□ 0.93
COPS7A-216ENST00000543170 DDX25Q9UHL0 483 aaKnown RBP20.84■□□□□ 0.93
COPS7A-216ENST00000543170 TBX21Q9UL17 535 aa20.84■□□□□ 0.93
COPS7A-216ENST00000543170 ZMYND8Q9ULU4 1186 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms