RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 PPP1R37O75864 691 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NR1D1P20393 614 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 HMGB2P26583 209 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TECP42680 631 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 GRIK3Q13003 919 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NONOQ15233 471 aaKnown RBP eCLIP6.19□□□□□ -1.423e-6■■■■□ 21.8
ZEB1-209ENST00000542879 TMEM119Q4V9L6 283 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 DPY19L2P1Q6NXN4 242 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TMC4Q7Z404 712 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 HEATR3Q7Z4Q2 680 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NEK8Q86SG6 692 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ZC3H3Q8IXZ2 948 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ANKRD13CQ8N6S4 541 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ATP6V1G3Q96LB4 118 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MMRN2Q9H8L6 949 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TMBIM4Q9HC24 238 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 EPB41L5Q9HCM4 733 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PLCB1Q9NQ66 1216 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 USP17L3A6NCW0 530 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 USP17L4A6NCW7 530 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PALMO75781 387 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 SERPING1P05155 500 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MDH1P40925 334 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ATP1A2P50993 1020 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MARSP56192 900 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 GUCY1A3Q02108 690 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 GUCY2DQ02846 1103 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ITPK1Q13572 414 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TRADDQ15628 312 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ERFEQ4G0M1 354 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 KCTD16Q68DU8 428 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PPP4R3AQ6IN85 833 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TLDC1Q6P9B6 456 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 LRIG3Q6UXM1 1119 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 SV2BQ7L1I2 683 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 USP17L1Q7RTZ2 530 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PROM2Q8N271 834 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 GLIS3Q8NEA6 775 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MYCBPAPQ8TBZ2 947 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.19□□□□□ -1.424e-7■■■■■ 33
ZEB1-209ENST00000542879 KCNN1Q92952 543 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 DYNLL2Q96FJ2 89 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 RUFY1Q96T51 708 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 TMEM47Q9BQJ4 181 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 LZTS2Q9BRK4 669 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 SPATA31A1Q5TZJ5 1347 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ESYT2A0FGR8 921 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 HMGB1P1B2RPK0 211 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MYO1FO00160 1098 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 RAD51CO43502 376 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 FGFR1OPO95684 399 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 KLRC1P26715 233 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NOVP48745 357 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ATP2B2Q01814 1243 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PSMD2Q13200 908 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 PLCB4Q15147 1175 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 UAP1Q16222 522 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 LETM2Q2VYF4 491 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 CFAP58Q5T655 872 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NLRP14Q86W24 1093 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 USP38Q8NB14 1042 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 RAD54LQ92698 747 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 CELF1Q92879 486 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 MYCBPQ99417 103 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NUCKS1Q9H1E3 243 aaKnown RBP6.19□□□□□ -1.42
ZEB1-209ENST00000542879 VCPKMTQ9H867 229 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 RIC8AQ9NPQ8 531 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 SLC12A6Q9UHW9 1150 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 NENFQ9UMX5 172 aa6.19□□□□□ -1.42
ZEB1-209ENST00000542879 ATP8B3O60423 1300 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 RASSF9O75901 435 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 FAM107AO95990 144 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 RASA1P20936 1047 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 HDLBPQ00341 1268 aaKnown RBP6.18□□□□□ -1.42
ZEB1-209ENST00000542879 SLC18A3Q16572 532 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 SCFD2Q8WU76 684 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 LARP4BQ92615 738 aaKnown RBP6.18□□□□□ -1.42
ZEB1-209ENST00000542879 DNAJC19Q96DA6 116 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 CCT8L2Q96SF2 557 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 ISCUQ9H1K1 167 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 GANQ9H2C0 597 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 MCM9Q9NXL9 1143 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 BTG4Q9NY30 223 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 AIPL1Q9NZN9 384 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 ATP6V0A2Q9Y487 856 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 PCDHA2Q9Y5H9 948 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 CAPN7Q9Y6W3 813 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 ERVK-9P63128 1117 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 ACTN3Q08043 901 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-209ENST00000542879 SLC10A5Q5PT55 438 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 FAM83BQ5T0W9 1011 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 KCNK18Q7Z418 384 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 CCDC91Q7Z6B0 441 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 C3orf20Q8ND61 904 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 TBCKQ8TEA7 893 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 CALML4Q96GE6 196 aa6.18□□□□□ -1.42
ZEB1-209ENST00000542879 CABS1Q96KC9 395 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms