RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
NPIPB3-210ENST00000542817 NFASCO94856 1347 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 MYADML2A6NDP7 307 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 TBX3O15119 743 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 NEMFO60524 1076 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 ADAMTS4O75173 837 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 GGPS1O95749 300 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 AKR1A1P14550 325 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 SLC39A14Q15043 492 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 CCSAPQ6IQ19 270 aaPredicted RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 NAP1L4Q99733 375 aaKnown RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 UPF3AQ9H1J1 476 aaKnown RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 PKD2L1Q9P0L9 805 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 FAM184BQ9ULE4 1060 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
NPIPB3-210ENST00000542817 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 EML1O00423 815 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 SORBS3O60504 671 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 DUSP11O75319 330 aaKnown RBP12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 ATG7O95352 703 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 OR52Z1P0C646 297 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 CCL5P13501 91 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 GJA9P57773 515 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 CALCRLQ16602 461 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 METTL7BQ6UX53 244 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 KLHDC9Q8NEP7 349 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 PCYT2Q99447 389 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 RIT2Q99578 217 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 Q9Y3F1 56 aa12.08□□□□□ -0.48
NPIPB3-210ENST00000542817 SYNRGQ9UMZ2 1314 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 IGKV6D-21A0A0A0MT36 114 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 A6NJR5 290 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 PGK1P00558 417 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 PRPHP41219 470 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 PPP2R5CQ13362 524 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 ATL3Q6DD88 541 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 GPR20Q99678 358 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 HMX1Q9NP08 348 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-210ENST00000542817 TCHHQ07283 1943 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 YEATS4O95619 227 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 MARCKSP29966 332 aaPredicted RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 CNGA1P29973 690 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 TXKP42681 527 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 ACTR2P61160 394 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 NEDD9Q14511 834 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 LRCH2Q5VUJ6 765 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 ARL6IP4Q66PJ3 421 aaKnown RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 ZNF396Q96N95 335 aaPredicted RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 JPH1Q9HDC5 661 aaPredicted RBP12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 OGDHLQ9ULD0 1010 aa12.06□□□□□ -0.48
NPIPB3-210ENST00000542817 POTEMA6NI47 508 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 LAD1O00515 517 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 GAS7O60861 476 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 STBD1O95210 358 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 GH1P01241 217 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 MMP3P08254 477 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 TECP42680 631 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 BEX3Q00994 111 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 ZNF746Q6NUN9 644 aaPredicted RBP12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 DHX37Q8IY37 1157 aaKnown RBP12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms