RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 GTF2F1P35269 517 aaKnown RBP eCLIP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 GRK3P35626 688 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 STAT5AP42229 794 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 SARSP49591 514 aaKnown RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 ZXDAP98168 799 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 EFEMP1Q12805 493 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 IFRD2Q12894 506 aaPredicted RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 SMAD4Q13485 552 aaKnown RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 LONRF2Q1L5Z9 754 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 MTERF2Q49AM1 385 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 FOXB2Q5VYV0 432 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 TEPPQ6URK8 271 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 ZNF761Q86XN6 746 aaPredicted RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 IFNL3Q8IZI9 196 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 TTLL6Q8N841 843 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 TOE1Q96GM8 510 aaKnown RBP5.61□□□□□ -1.51
LEMD3-204ENST00000542032 MENTQ9BUN1 341 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 SRRDQ9UH36 339 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 WASF3Q9UPY6 502 aa5.61□□□□□ -1.51
LEMD3-204ENST00000542032 BLACEA4D250 179 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 WNT9AO14904 365 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
LEMD3-204ENST00000542032 DIAPH1O60610 1272 aaKnown RBP5.6□□□□□ -1.51
LEMD3-204ENST00000542032 MAFKO60675 156 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 NKX3-2P78367 333 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 TTLL7Q6ZT98 887 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 DPH6Q7L8W6 267 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 PROSER1Q86XN7 944 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 ZDHHC14Q8IZN3 488 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 JMYQ8N9B5 988 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 UHMK1Q8TAS1 419 aaKnown RBP5.6□□□□□ -1.51
LEMD3-204ENST00000542032 PIP4K2CQ8TBX8 421 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 MKL1Q969V6 931 aa5.6□□□□□ -1.51
LEMD3-204ENST00000542032 FAM221BA6H8Z2 402 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 KRIT1O00522 736 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 SSRP1Q08945 709 aaKnown RBP5.59□□□□□ -1.51
LEMD3-204ENST00000542032 NT5DC1Q5TFE4 455 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 MAMDC2Q7Z304 686 aaPredicted RBP5.59□□□□□ -1.51
LEMD3-204ENST00000542032 SLC16A11Q8NCK7 471 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 ADAMTS17Q8TE56 1095 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 CLEC4DQ8WXI8 215 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 KISS1RQ969F8 398 aaPredicted RBP5.59□□□□□ -1.51
LEMD3-204ENST00000542032 EXOC2Q96KP1 924 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 GPR20Q99678 358 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 ADAM7Q9H2U9 754 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 PFDN2Q9UHV9 154 aa5.59□□□□□ -1.51
LEMD3-204ENST00000542032 TRBV23-1A0A0A0MS06 115 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 PRICKLE3O43900 615 aaPredicted RBP5.58□□□□□ -1.52
LEMD3-204ENST00000542032 SOD2P04179 222 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 FAM153BP0C7A2 387 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 ZNF28P17035 718 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 EPHA5P54756 1037 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 RTP5Q14D33 572 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 FAM26FQ5R3K3 315 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 STK32CQ86UX6 486 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 TRIM48Q8IWZ4 208 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 PTPRN2Q92932 1015 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 DEPDC7Q96QD5 511 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 LNPKQ9C0E8 428 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 SNTG2Q9NY99 539 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 TRAF6Q9Y4K3 522 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 TELO2Q9Y4R8 837 aa5.58□□□□□ -1.52
LEMD3-204ENST00000542032 FAM47E-STBD1D6RA91 191 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 AQP7O14520 342 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 SLC27A2O14975 620 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
LEMD3-204ENST00000542032 SUMO1P63165 101 aaKnown RBP5.57□□□□□ -1.52
LEMD3-204ENST00000542032 ZC3H12BQ5HYM0 836 aaKnown RBP5.57□□□□□ -1.52
LEMD3-204ENST00000542032 YIPF4Q9BSR8 244 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 IPPKQ9H8X2 491 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 DUSP10Q9Y6W6 482 aa5.57□□□□□ -1.52
LEMD3-204ENST00000542032 KDM2BQ8NHM5 1336 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 CCDC85CA6NKD9 419 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 ARVCFO00192 962 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 FSHBP01225 129 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 SPIRE1Q08AE8 756 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 SF3A1Q15459 793 aaKnown RBP5.56□□□□□ -1.52
LEMD3-204ENST00000542032 SOGA3Q5TF21 947 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 SH3RF2Q8TEC5 729 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 TMEM209Q96SK2 561 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 DHRS4Q9BTZ2 278 aa5.56□□□□□ -1.52
LEMD3-204ENST00000542032 PPP1R1BQ9UD71 204 aaPredicted RBP5.56□□□□□ -1.52
LEMD3-204ENST00000542032 C9orf118A6NHY6 69 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 LTFP02788 710 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 GNAT1P11488 350 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 COL6A1P12109 1028 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 COL6A2P12110 1019 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 FAHP16930 419 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 HMGA2P52926 109 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 GJA9P57773 515 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 GABREP78334 506 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 TUSC3Q13454 348 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 PAN2Q504Q3 1202 aaKnown RBP5.55□□□□□ -1.52
LEMD3-204ENST00000542032 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
LEMD3-204ENST00000542032 TXNDC5Q8NBS9 432 aaKnown RBP5.55□□□□□ -1.52
LEMD3-204ENST00000542032 PCDH19Q8TAB3 1148 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms