RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CRKP46108 304 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 PPFIA1Q13136 1202 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 UAP1Q16222 522 aaPredicted RBP17.63■□□□□ 0.41
VARS2-212ENST00000542001 ZNF746Q6NUN9 644 aaPredicted RBP17.63■□□□□ 0.41
VARS2-212ENST00000542001 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 JRKLQ9Y4A0 524 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 MST1RQ04912 1400 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 F5H6K3 240 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 STXBP3O00186 592 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 KLRC3Q07444 240 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 ALKBH5Q6P6C2 394 aaKnown RBP17.63■□□□□ 0.41
VARS2-212ENST00000542001 ANKRD42Q8N9B4 389 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 CAPS2Q9BXY5 557 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 TRIM49P0CI25 452 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 TRIM49CP0CI26 452 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 KCNH2Q12809 1159 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 TRAF1Q13077 416 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
VARS2-212ENST00000542001 ZBTB5O15062 677 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 INPP5BP32019 993 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 PDE6BP35913 854 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 LACRTQ9GZZ8 138 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 IFNB1P01574 187 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 GGCXP38435 758 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 ARHGAP4P98171 946 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 APBA1Q02410 837 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 SNX1Q13596 522 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 SLFN12Q8IYM2 578 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 IMPG2Q9BZV3 1241 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 PI4KBQ9UBF8 816 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
VARS2-212ENST00000542001 ATP8A1Q9Y2Q0 1164 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 KIF4AO95239 1232 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 AFPP02771 609 aaKnown RBP17.62■□□□□ 0.41
VARS2-212ENST00000542001 CHRNA5P30532 468 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 SMTNP53814 917 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 PDCLQ13371 301 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 ZNF211Q13398 564 aaPredicted RBP17.62■□□□□ 0.41
VARS2-212ENST00000542001 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 PNKPQ96T60 521 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 INTS13Q9NVM9 706 aa17.62■□□□□ 0.41
VARS2-212ENST00000542001 SLC37A4O43826 429 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 ABL1P00519 1130 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 CHURC1Q8WUH1 139 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 CCDC17Q96LX7 622 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 MTRF1LQ9UGC7 380 aaKnown RBP17.61■□□□□ 0.41
VARS2-212ENST00000542001 CD19P15391 556 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 NFIAQ12857 509 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 AOC3Q16853 763 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 BANK1Q8NDB2 785 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 LRRC1Q9BTT6 524 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 PLVAPQ9BX97 442 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 MTMR4Q9NYA4 1195 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 ACTN2P35609 894 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 PLTPP55058 493 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 RAD54LQ92698 747 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 CABS1Q96KC9 395 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
VARS2-212ENST00000542001 SYDE2Q5VT97 1194 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 TMED8Q6PL24 325 aaPredicted RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 ARFGAP2Q8N6H7 521 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 RPGRIP1Q96KN7 1286 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 LARSQ9P2J5 1176 aaKnown RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 TRIP13Q15645 432 aaPredicted RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 DDX47Q9H0S4 455 aaKnown RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 RIC8AQ9NPQ8 531 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 IL17RBQ9NRM6 502 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 LIMA1Q9UHB6 759 aaKnown RBP17.6■□□□□ 0.41
VARS2-212ENST00000542001 GNA14O95837 355 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 CCDC170Q8IYT3 715 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 MAD2L2Q9UI95 211 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
VARS2-212ENST00000542001 PAF1Q8N7H5 531 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 TTC16Q8NEE8 873 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 PDHBP11177 359 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 BCRP11274 1271 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 UBE2TQ9NPD8 197 aaPredicted RBP17.59■□□□□ 0.41
VARS2-212ENST00000542001 SH3GLB2Q9NR46 395 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 NMT1P30419 496 aaKnown RBP17.59■□□□□ 0.41
VARS2-212ENST00000542001 SH2D3CQ8N5H7 860 aa17.59■□□□□ 0.41
VARS2-212ENST00000542001 ZNF668Q96K58 619 aaPredicted RBP17.59■□□□□ 0.41
VARS2-212ENST00000542001 RRP15Q9Y3B9 282 aaKnown RBP17.59■□□□□ 0.41
VARS2-212ENST00000542001 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.41
VARS2-212ENST00000542001 PRPHP41219 470 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 PLA2G4AP47712 749 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 NLRX1Q86UT6 975 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.41
VARS2-212ENST00000542001 GIMAP7Q8NHV1 300 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 LRRC45Q96CN5 670 aa17.58■□□□□ 0.41
VARS2-212ENST00000542001 NUCKS1Q9H1E3 243 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms