RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 GMNCA6NCL1 334 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 ARID5AQ03989 594 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 TBC1D1Q86TI0 1168 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 NSMCE1Q8WV22 266 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 NOC4LQ9BVI4 516 aaKnown RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 EXOC1Q9NV70 894 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 LEMD3Q9Y2U8 911 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 TCP1P17987 556 aaKnown RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 FECHP22830 423 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 PFKFB3Q16875 520 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 HVCN1Q96D96 273 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 ZBTB10Q96DT7 871 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 USP40Q9NVE5 1235 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 CTNNA1P35221 906 aaKnown RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 SCTRP47872 440 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 KCTD1Q719H9 257 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 ELOA2Q8IYF1 753 aaPredicted RBP18.38■□□□□ 0.53
PDCD2-208ENST00000541970 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 PCDHA13Q9Y5I0 950 aa18.38■□□□□ 0.53
PDCD2-208ENST00000541970 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 SLC8A1P32418 973 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 RCSD1Q6JBY9 416 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 ARFGAP2Q8N6H7 521 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 DNAJC7Q99615 494 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 YIPF3Q9GZM5 350 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 ACTR5Q9H9F9 607 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 GGT7Q9UJ14 662 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 ANAPC4Q9UJX5 808 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 PSMA7O14818 248 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 TM4SF1P30408 202 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 EIF4A3P38919 411 aaKnown RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 CFAP221Q4G0U5 840 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 FAM133BQ5BKY9 247 aaKnown RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 SEC16BQ96JE7 1060 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 CALR3Q96L12 384 aaKnown RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
PDCD2-208ENST00000541970 PPP1R1BQ9UD71 204 aaPredicted RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 NOVA2Q9UNW9 492 aaKnown RBP18.37■□□□□ 0.53
PDCD2-208ENST00000541970 EME2A4GXA9 379 aaPredicted RBP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 H7C1D1 291 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 UPP2O95045 317 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 EPB41P11171 864 aaKnown RBP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 ZNF658Q5TYW1 1059 aaPredicted RBP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 AP1ARQ63HQ0 302 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 HSPA1LP34931 641 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 DNM2P50570 870 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 ANKRD20A8PQ5CZ79 823 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 TSGA10Q9BZW7 698 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 SPATS2LQ9NUQ6 558 aaKnown RBP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 TBC1D7Q9P0N9 293 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 ZNF263O14978 683 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 GNAQP50148 359 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 UBE2SQ16763 222 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 GKAP1Q5VSY0 366 aaPredicted RBP18.36■□□□□ 0.53
PDCD2-208ENST00000541970 RRAGAQ7L523 313 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 NOD2Q9HC29 1040 aa18.36■□□□□ 0.53
PDCD2-208ENST00000541970 UTRNP46939 3433 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 BMP15O95972 392 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 KIF11P52732 1056 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 IFFO1Q0D2I5 559 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 ARMC2Q8NEN0 867 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 FAM167BQ9BTA0 163 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 MYH10P35580 1976 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
PDCD2-208ENST00000541970 ORC4O43929 436 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 GYS1P13807 737 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 RASA1P20936 1047 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 WLSQ5T9L3 541 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 CACNA2D4Q7Z3S7 1137 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 IRF2BP1Q8IU81 584 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 SELENOSQ9BQE4 189 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 C6orf50Q9HD87 102 aa18.35■□□□□ 0.53
PDCD2-208ENST00000541970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDCD2-208ENST00000541970 TLDC2A0PJX2 215 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 EHHADHQ08426 723 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 FUT2Q10981 343 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 FAM43BQ6ZT52 329 aaPredicted RBP18.34■□□□□ 0.53
PDCD2-208ENST00000541970 MDM1Q8TC05 714 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
PDCD2-208ENST00000541970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.34■□□□□ 0.53
PDCD2-208ENST00000541970 TRIM31Q9BZY9 425 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 CCDC113Q9H0I3 377 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 LRRC10BA6NIK2 292 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 TMCO5BA8MYB1 307 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 HMGB1P1B2RPK0 211 aaPredicted RBP18.34■□□□□ 0.53
PDCD2-208ENST00000541970 CYTH3O43739 400 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 APBA3O96018 575 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 ZBED6P86452 979 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 TBC1D16Q8TBP0 767 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms